RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 SLC35B4Q969S0 331 aa13.13□□□□□ -0.31
PGBD2-202ENST00000355360 HCAR1Q9BXC0 346 aa13.13□□□□□ -0.31
PGBD2-202ENST00000355360 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
PGBD2-202ENST00000355360 NEK6Q9HC98 313 aa13.13□□□□□ -0.31
PGBD2-202ENST00000355360 DDX28Q9NUL7 540 aaKnown RBP13.13□□□□□ -0.31
PGBD2-202ENST00000355360 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
PGBD2-202ENST00000355360 WBP11Q9Y2W2 641 aaKnown RBP13.13□□□□□ -0.31
PGBD2-202ENST00000355360 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
PGBD2-202ENST00000355360 A0A075B6Q4 140 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 FABP12A6NFH5 140 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 K7EQS6 105 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PEX12O00623 359 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PRODHO43272 600 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
PGBD2-202ENST00000355360 C5AR1P21730 350 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ADPRHP54922 357 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 RUNX2Q13950 521 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ZNF542PQ5EBM4 170 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 TMEM196Q5HYL7 178 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 FIGNL1Q6PIW4 674 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 FRRS1Q6ZNA5 592 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 AMIGO1Q86WK6 493 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ATP6V1C2Q8NEY4 427 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 OR51G2Q8NGK0 314 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PRRG3Q9BZD7 231 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 C20orf141Q9NUB4 165 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 SLC17A4Q9Y2C5 497 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ARID1BQ8NFD5 2236 aaPredicted RBP13.12□□□□□ -0.31
PGBD2-202ENST00000355360 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PRSS38A1L453 326 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 GSAPA4D1B5 854 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 CSF3P09919 207 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ACTR1BP42025 376 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 MAGEA8P43361 318 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 ACTR1AP61163 376 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
PGBD2-202ENST00000355360 COX10Q12887 443 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 CPOQ8IVL8 374 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 NATD1Q8N6N6 113 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 SIRT6Q8N6T7 355 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 OR56A1Q8NGH5 318 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 TP53INP1Q96A56 240 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 AGAP4Q96P64 663 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 PBX4Q9BYU1 374 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 C11orf54Q9H0W9 315 aaPredicted RBP13.12□□□□□ -0.31
PGBD2-202ENST00000355360 HINT3Q9NQE9 182 aaKnown RBP13.12□□□□□ -0.31
PGBD2-202ENST00000355360 LIPT1Q9Y234 373 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
PGBD2-202ENST00000355360 C5orf67F2Z3F1 127 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 CASKO14936 926 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 HPGDSO60760 199 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 CPN2P22792 545 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 CMPK1P30085 196 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 HTR3AP46098 478 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 PPP1CAP62136 330 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 DMPKQ09013 629 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 EXOSC7Q15024 291 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 TRAM2Q15035 370 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 ATAD3CQ5T2N8 411 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 ZNF517Q6ZMY9 492 aaPredicted RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 ZNF836Q6ZNA1 936 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 RTL10Q7L3V2 364 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 SLC41A3Q96GZ6 507 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 C10orf90Q96M02 699 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 SECISBP2Q96T21 854 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 C3orf14Q9HBI5 128 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 CTSBP07858 339 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 MRPL3P09001 348 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 DDX5P17844 614 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 TBXA2RP21731 343 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 SLC1A3P43003 542 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 SLC16A1P53985 500 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 TSPAN31Q12999 210 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 FAM214AQ32MH5 1076 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 PUS10Q3MIT2 529 aaKnown RBP13.11□□□□□ -0.31
PGBD2-202ENST00000355360 FAM27D1Q5T7N8 215 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 PLBD1Q6P4A8 553 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 IL20RBQ6UXL0 311 aa13.11□□□□□ -0.31
PGBD2-202ENST00000355360 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms