RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 LTBQ06643 244 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 IFFO1Q0D2I5 559 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 C2orf80Q0P641 193 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 STX5Q13190 355 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 TMEM44Q2T9K0 475 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 APOOLQ6UXV4 268 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 BIVMQ86UB2 503 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 LCA5Q86VQ0 697 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 OR2L13Q8N349 312 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 OR2W6PQ8NHA6 318 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 CDC26Q8NHZ8 85 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 BBS4Q96RK4 519 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 PIGQQ9BRB3 760 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 LMF2Q9BU23 707 aaKnown RBP14.29□□□□□ -0.12
PDGFA-201ENST00000354513 RNF122Q9H9V4 155 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 NEUROD4Q9HD90 331 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 MYNNQ9NPC7 610 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 GIMAP4Q9NUV9 329 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 TAS2R7Q9NYW3 318 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 ABCG2Q9UNQ0 655 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 OR10H1Q9Y4A9 318 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 CCL27Q9Y4X3 112 aa14.29□□□□□ -0.12
PDGFA-201ENST00000354513 POLR3HQ9Y535 204 aaPredicted RBP14.29□□□□□ -0.12
PDGFA-201ENST00000354513 FN1P02751 2386 aaKnown RBP14.29□□□□□ -0.12
PDGFA-201ENST00000354513 SHISA8B8ZZ34 492 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 COQ9O75208 318 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDGFA-201ENST00000354513 IL33O95760 270 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 CRYGSP22914 178 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 MPIP34949 423 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 CD79BP40259 229 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 GSTM5P46439 218 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 NCBP2P52298 156 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDGFA-201ENST00000354513 SIRPAP78324 504 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 RAET1LQ5VY80 246 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 SH2D5Q6ZV89 423 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 ZNF550Q7Z398 422 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 P4HA3Q7Z4N8 544 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 GGNQ86UU5 652 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 SLC22A9Q8IVM8 553 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 CIARTQ8N365 385 aaPredicted RBP14.28□□□□□ -0.12
PDGFA-201ENST00000354513 CNEP1R1Q8N9A8 125 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 FNDC9Q8TBE3 224 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 HOXB13Q92826 284 aaPredicted RBP14.28□□□□□ -0.12
PDGFA-201ENST00000354513 ARSGQ96EG1 525 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 C1GALT1C1Q96EU7 318 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 PGM2Q96G03 612 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 AMDHD1Q96NU7 426 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 NPAS1Q99742 590 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 KLHDC3Q9BQ90 382 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 SHCBP1LQ9BZQ2 653 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 MID1IP1Q9NPA3 183 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 FAM120CQ9NX05 1096 aaKnown RBP14.28□□□□□ -0.12
PDGFA-201ENST00000354513 SENP1Q9P0U3 644 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 STK38LQ9Y2H1 464 aa14.28□□□□□ -0.12
PDGFA-201ENST00000354513 IGLV3-32A0A0A0MS00 114 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 GXYLT2A0PJZ3 443 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 SMIM23A6NLE4 172 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 SEC14L5O43304 696 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 INHBBP09529 407 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 PYGBP11216 843 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 UGT2B10P36537 528 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 MAP3K8P41279 467 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 EEF1A1P68104 462 aaKnown RBP14.27□□□□□ -0.12
PDGFA-201ENST00000354513 GANABQ14697 944 aaKnown RBP14.27□□□□□ -0.12
PDGFA-201ENST00000354513 CYP27C1Q4G0S4 372 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 EEF1A1P5Q5VTE0 462 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 OR2A2Q6IF42 318 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 MARCH3Q86UD3 253 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 PPP1R14CQ8TAE6 165 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 EPS8L3Q8TE67 593 aaKnown RBP14.27□□□□□ -0.12
PDGFA-201ENST00000354513 IGFBPL1Q8WX77 278 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 ELP4Q96EB1 424 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 EGLN2Q96KS0 407 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 PINK1Q9BXM7 581 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 PPCSQ9HAB8 311 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 PSMC3IPQ9P2W1 217 aaPredicted RBP14.27□□□□□ -0.12
PDGFA-201ENST00000354513 NDRG3Q9UGV2 375 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 GRID1Q9ULK0 1009 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 PTGDR2Q9Y5Y4 395 aa14.27□□□□□ -0.12
PDGFA-201ENST00000354513 A0A1W2PPM1 405 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 TLDC2A0PJX2 215 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 H3BML4 177 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 EMC8O43402 210 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 TNFRSF21O75509 655 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 AQP8O94778 261 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 SLITRK5O94991 958 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 PROCP04070 461 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 GSTA1P08263 222 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 MRPS22P82650 360 aaKnown RBP14.26□□□□□ -0.13
PDGFA-201ENST00000354513 KIAA0040Q15053 153 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 PON3Q15166 354 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 GRAMD1BQ3KR37 738 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 ZNF385BQ569K4 471 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 SPDYAQ5MJ70 313 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 Q5PR19 223 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 LGSNQ5TDP6 509 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 SHEQ5VZ18 495 aa14.26□□□□□ -0.13
PDGFA-201ENST00000354513 ZYG11AQ6WRX3 759 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms