RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TLN2Q9Y4G6 2542 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 PKD1L1Q8TDX9 2849 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 IGHV1OR21-1A0A087WYE8 117 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 OR6C74A6NCV1 312 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 OR5K3A6NET4 321 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 C5orf58C9J3I9 102 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 PPM1DO15297 605 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ZSCAN9O15535 394 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 MRPS14O60783 128 aaKnown RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 B4GALT2O60909 372 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SLITRK5O94991 958 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 IFNW1P05000 195 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 FHP07954 510 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 CCDC159P0C7I6 412 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ANXA8P13928 327 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 CTSEP14091 401 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 RHCEP18577 417 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 NELFEP18615 380 aaKnown RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 MAGP20916 626 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 PAX7P23759 505 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 CRHBPP24387 322 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 AQP1P29972 269 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 RRM2P31350 389 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 BUD31P41223 144 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 NCBP2P52298 156 aaKnown RBP eCLIP7.64□□□□□ -1.19
CD44-205ENST00000352818 CXCR4P61073 352 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ISL1P61371 349 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 RPS18P62269 152 aaKnown RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 TEKQ02763 1124 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 GNA13Q14344 377 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 MAPK11Q15759 364 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ZBED5Q49AG3 693 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 C6orf141Q5SZD1 244 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 FBXO42Q6P3S6 717 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ISLR2Q6UXK2 745 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ABHD13Q7L211 337 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 CYP4Z1Q86W10 505 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 OOSP2Q86WS3 158 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 LGI4Q8N135 537 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 CAMKVQ8NCB2 501 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 GALNT6Q8NCL4 622 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SPPL2AQ8TCT8 520 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 GIPC3Q8TF64 312 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SLC38A5Q8WUX1 472 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ZFAND2BQ8WV99 257 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 CNRIP1Q96F85 164 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 TMEM19Q96HH6 336 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 DHRS1Q96LJ7 313 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ZNF681Q96N22 645 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 BBS4Q96RK4 519 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ZNF607Q96SK3 696 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SMAD5Q99717 465 aaKnown RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 FOXC2Q99958 501 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SERHL2Q9H4I8 314 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SOX17Q9H6I2 414 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 AKIRIN1Q9H9L7 192 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 LYRM4Q9HD34 91 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 KRT84Q9NSB2 600 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 MS4A12Q9NXJ0 267 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 SIDT1Q9NXL6 827 aaKnown RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 PDP1Q9P0J1 537 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 KIF17Q9P2E2 1029 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ENOPH1Q9UHY7 261 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 PSME2Q9UL46 239 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 NDRG4Q9ULP0 352 aaKnown RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 B3GNT3Q9Y2A9 372 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 POFUT2Q9Y2G5 429 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 ATG4BQ9Y4P1 393 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 GPC6Q9Y625 555 aaPredicted RBP7.64□□□□□ -1.19
CD44-205ENST00000352818 CEPT1Q9Y6K0 416 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 U3KQV3 271 aa7.64□□□□□ -1.19
CD44-205ENST00000352818 A0A0G2JN53 185 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 A0A1B0GUH1 482 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 GSAPA4D1B5 854 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 PRAMEF25A6NGN4 478 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 TNFRSF11BO00300 401 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 EMC8O43402 210 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 B3GALT2O43825 422 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CTSVO60911 334 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 OR6B1O95007 311 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 DIRAS1O95057 198 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 MFN2O95140 757 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 OXSR1O95747 527 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 OPN1SWP03999 348 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 BCHEP06276 602 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 ZNF888P0CJ79 500 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 ETS2P15036 469 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 POLR2CP19387 275 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 PRKACGP22612 351 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 PPP2R1BP30154 601 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 GSTT1P30711 240 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 MPIP34949 423 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 GPC1P35052 558 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 KCNJ5P48544 419 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CLK3P49761 638 aaKnown RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 CRISP3P54108 245 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 CDH15P55291 814 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 TPD52P55327 224 aaPredicted RBP7.63□□□□□ -1.19
CD44-205ENST00000352818 ESRRGP62508 458 aa7.63□□□□□ -1.19
CD44-205ENST00000352818 PRR5P85299 388 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms