RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 A0A1B0GUH1 482 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LRIT2A6NDA9 550 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 ZNF729A6NN14 1252 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 EFCAB14O75071 495 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 OAZ2O95190 189 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GAAP10253 952 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 IFNGR1P15260 489 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 SPI1P17947 270 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GIPRP48546 466 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 MTNR1BP49286 362 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 BACE1P56817 501 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 ECH1Q13011 328 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 SLC25A35Q3KQZ1 300 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 CPTPQ5TA50 214 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 PTRHD1Q6GMV3 140 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 BEND4Q6ZU67 534 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 NPAS3Q8IXF0 933 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 RAD51AP1Q96B01 352 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 PDGFDQ9GZP0 370 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 SEBOXQ9HB31 216 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 MAP4K5Q9Y4K4 846 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LOC285556D6RIA3 1793 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LRRN3E7EW58 273 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GPR37O15354 613 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 AQP8O94778 261 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 CD63P08962 238 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 CNR1P21554 472 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 ACVRL1P37023 503 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GDNFP39905 211 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 PTGER3P43115 390 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LRRC74AQ0VAA2 488 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 RAB33AQ14088 237 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 NAA40Q86UY6 237 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 SETD7Q8WTS6 366 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 FUBP3Q96I24 572 aaKnown RBP eCLIP12.44□□□□□ -0.42
IFT88-202ENST00000351808 TRIB3Q96RU7 358 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 PBX4Q9BYU1 374 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LRRN3Q9H3W5 708 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 MARK1Q9P0L2 795 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 KCND3Q9UK17 655 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 SEPT4O43236 478 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 PRODHO43272 600 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 SMAD6O43541 496 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 SNAPC5O75971 98 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 UBL3O95164 117 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 NFATC1O95644 943 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 TYRP14679 529 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 LPOP22079 712 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 EEF1A1P68104 462 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 DCDP81605 110 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 EEF1A2Q05639 463 aaKnown RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 EEF1A1P5Q5VTE0 462 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GLDNQ6ZMI3 551 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 IKBIPQ70UQ0 350 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 OR4K1Q8NGD4 311 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 OR52B4Q8NGK2 314 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 OR5M1Q8NGP8 315 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GCDHQ92947 438 aaPredicted RBP12.44□□□□□ -0.42
IFT88-202ENST00000351808 VOPP1Q96AW1 172 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 GINS4Q9BRT9 223 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 CTPS2Q9NRF8 586 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 FBXW2Q9UKT8 454 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 PTCH2Q9Y6C5 1203 aa12.44□□□□□ -0.42
IFT88-202ENST00000351808 BTAF1O14981 1849 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 GP1BAP07359 652 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 NPBWR1P48145 328 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 DGKGP49619 791 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 CCR9P51686 369 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 RAB5BP61020 215 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
IFT88-202ENST00000351808 DDX39BQ13838 428 aaKnown RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 C2orf68Q2NKX9 166 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 MARCH8Q5T0T0 291 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 RBM45Q8IUH3 476 aaKnown RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 CLDN19Q8N6F1 224 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 TMIEQ8NEW7 156 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 OR4D9Q8NGE8 314 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 OR5AK3PQ8NH89 298 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 MFFQ9GZY8 342 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 P2RY12Q9H244 342 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 GKN1Q9NS71 199 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 ASB6Q9NWX5 421 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 AFF4Q9UHB7 1163 aaKnown RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 OPN4Q9UHM6 478 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 A0A1W2PRB8 838 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 CREBL2O60519 120 aaPredicted RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 PRPH2P23942 346 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 NFYBP25208 207 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 MPGP29372 298 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms