RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CCNJQ5T5M9 372 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SLC35F2Q8IXU6 374 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SPRYD4Q8WW59 207 aaPredicted RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 MYEF2Q9P2K5 600 aaKnown RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 FUOMA2VDF0 154 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 MAN2B1O00754 1011 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 NDUFB2O95178 105 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 CDK1P06493 297 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 DRD5P21918 477 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 CRHBPP24387 322 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 LILRA2Q8N149 483 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SDR9C7Q8NEX9 313 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 OR5AK2Q8NH90 309 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 BCL7BQ9BQE9 202 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 RTP3Q9BQQ7 232 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 WDR83Q9BRX9 315 aaKnown RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 RAD1O60671 282 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 KLKB1P03952 638 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 CST5P28325 142 aaPredicted RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SYPL1Q16563 259 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SLC18B1Q6NT16 456 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 Q6ZPB1 254 aaPredicted RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 HORMAD2Q8N7B1 307 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 OR5W2Q8NH69 310 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 ADAMTS18Q8TE60 1221 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 DIO2Q92813 273 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 LMF1Q96S06 567 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 FAIMQ9NVQ4 179 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 A0A1B0GVG6 124 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 KIAA0355O15063 1070 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 PODNL1Q6PEZ8 512 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 VRK2Q86Y07 508 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 VWA5B2Q8N398 1253 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 FKBP10Q96AY3 582 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 OR2B2Q9GZK3 357 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SAP130Q9H0E3 1048 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 TMEM185BQ9H7F4 350 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 CCL26Q9Y258 94 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 IER3IP1Q9Y5U9 82 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 LRRTM2O43300 516 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 OR7A10O76100 309 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SYNGR4O95473 234 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 SOX9P48436 509 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 EXOSC7Q15024 291 aaKnown RBP15.1■□□□□ 0.01
PTPN11-201ENST00000351677 TMEM151BQ8IW70 566 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 TMIEQ8NEW7 156 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 GAL3ST3Q96A11 431 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 FBRSQ9HAH7 460 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 THSD1Q9NS62 852 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 UBQLN2Q9UHD9 624 aa15.1■□□□□ 0.01
PTPN11-201ENST00000351677 TEX13CA0A0J9YWL9 993 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 UPK1BO75841 260 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PTTG1O95997 202 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PVRP15151 417 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 NR4A2P43354 598 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 TM4SF4P48230 202 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 SNRPD2P62316 118 aaKnown RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 RAB11BQ15907 218 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 BCL2L15Q5TBC7 163 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 OR2A12Q8NGT7 310 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 SLC25A44Q96H78 314 aaPredicted RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PRRC1Q96M27 445 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 DPCDQ9BVM2 203 aaPredicted RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 MMP28Q9H239 520 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 GPN2Q9H9Y4 310 aaPredicted RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 DNMT3BQ9UBC3 853 aaKnown RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 DSC1Q08554 894 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PYHIN1Q6K0P9 492 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 CNIH2Q6PI25 160 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 FBXO46Q6PJ61 603 aaPredicted RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PCDHB16Q9NRJ7 776 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 MAST2Q6P0Q8 1798 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 BTAF1O14981 1849 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 MYO9BQ13459 2157 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 MAOBP27338 520 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PXNP49023 591 aaPredicted RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 CAPZA1P52907 286 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 PLP2Q04941 152 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 DCST2Q5T1A1 773 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 OR6C4Q8NGE1 309 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 POTEKPQ9BYX7 375 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 NAA50Q9GZZ1 169 aaKnown RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 MARCH5Q9NX47 278 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 RARRES3Q9UL19 164 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 NAALAD2Q9Y3Q0 740 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 HIDE1A8MVS5 230 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 C17orf105B2RV13 164 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 CASC3O15234 703 aaKnown RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 SEC14L5O43304 696 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 ARHGAP19Q14CB8 494 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 ALG10Q5BKT4 473 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 STOML3Q8TAV4 291 aa15.09■□□□□ 0.01
PTPN11-201ENST00000351677 CPPED1Q9BRF8 314 aaPredicted RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 AK6Q9Y3D8 172 aaKnown RBP15.09■□□□□ 0.01
PTPN11-201ENST00000351677 DNMT3AQ9Y6K1 912 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms