RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 C1orf94Q6P1W5 598 aa13.37□□□□□ -0.27
RLIM-202ENST00000349225 EIF4E3Q8N5X7 224 aaKnown RBP13.37□□□□□ -0.27
RLIM-202ENST00000349225 BRF2Q9HAW0 419 aa13.37□□□□□ -0.27
RLIM-202ENST00000349225 PTGFRNQ9P2B2 879 aa13.37□□□□□ -0.27
RLIM-202ENST00000349225 ANAPC1Q9H1A4 1944 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 OR2M5A3KFT3 312 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 MPTX1A8MV57 137 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 E9PI62 339 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 MTX2O75431 263 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ZNF254O75437 659 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 EGFP01133 1207 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 IGHA1P01876 353 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 C8GP07360 202 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 H2AFB1P0C5Y9 115 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 NSG1P42857 185 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 CDH11P55287 796 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 SPOUT1Q5T280 376 aaKnown RBP13.36□□□□□ -0.27
RLIM-202ENST00000349225 LRRC56Q8IYG6 542 aaPredicted RBP13.36□□□□□ -0.27
RLIM-202ENST00000349225 MED8Q96G25 268 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ZNF354BQ96LW1 612 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 SEMA4CQ9C0C4 833 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 SLC6A16Q9GZN6 736 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 OR10A4Q9H209 315 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ZNF768Q9H5H4 540 aaKnown RBP13.36□□□□□ -0.27
RLIM-202ENST00000349225 WDR26Q9H7D7 661 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 MGAT4CQ9UBM8 478 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 PURGQ9UJV8 347 aaKnown RBP13.36□□□□□ -0.27
RLIM-202ENST00000349225 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 A0A1W2PRQ8 180 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ANKDD1BA6NHY2 528 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 PRSS44E7EML9 344 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ANHXE9PGG2 379 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 GABRA1P14867 456 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 TAS2R50P59544 299 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 SNTB2Q13425 540 aaKnown RBP13.36□□□□□ -0.27
RLIM-202ENST00000349225 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 AADACL4Q5VUY2 407 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 APCDD1Q8J025 514 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ZDHHC1Q8WTX9 485 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 TEFMQ96QE5 360 aaKnown RBP13.36□□□□□ -0.27
RLIM-202ENST00000349225 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 TAAR2Q9P1P5 351 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 A0A1W2PRB8 838 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 TMEM202A6NGA9 273 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 D6RAR5 112 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 UGDHO60701 494 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 HPP00738 406 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 HFEQ30201 348 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ASPGQ86U10 573 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 OR4Q3Q8NH05 313 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 GSDMCQ9BYG8 508 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 CNIH4Q9P003 139 aa13.36□□□□□ -0.27
RLIM-202ENST00000349225 ZC3H12DA2A288 527 aaKnown RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 HYAL3O43820 417 aaPredicted RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 GJB5O95377 273 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 TGM6O95932 706 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 PEPDP12955 493 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 SNRPBP14678 240 aaKnown RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 NAE1Q13564 534 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 C2orf68Q2NKX9 166 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 ZNF660Q6AZW8 331 aaPredicted RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 FAM71E1Q6IPT2 247 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 RNF180Q86T96 592 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 MCATQ8IVS2 390 aaKnown RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 KLHL36Q8N4N3 616 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 RELL2Q8NC24 303 aaPredicted RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 NPIPB15A6NHN6 443 aaPredicted RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 ARHGEF33A8MVX0 844 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 SLC28A2O43868 658 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 SDC3O75056 442 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 UBXN7O94888 489 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 RHOAP61586 193 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 DEFA5Q01523 94 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 TPGS1Q6ZTW0 290 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 MRPL10Q7Z7H8 261 aaKnown RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 ECHDC3Q96DC8 303 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 OR1F2PQ96R84 312 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 SMAD5Q99717 465 aaKnown RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 DDX31Q9H8H2 851 aaKnown RBP13.35□□□□□ -0.27
RLIM-202ENST00000349225 MARK1Q9P0L2 795 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 IL20RAQ9UHF4 553 aa13.35□□□□□ -0.27
RLIM-202ENST00000349225 J3QRE1 110 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 SOCS6O14544 535 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 ARPC5O15511 151 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 VNN2O95498 520 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 SPAM1P38567 509 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 PLD1Q13393 1074 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 TUSC3Q13454 348 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 TMUB2Q71RG4 321 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 OR6T1Q8NGN1 323 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 ACTR10Q9NZ32 417 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 MRTO4Q9UKD2 239 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms