RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DHRS13Q6UX07 377 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 HMGN2P46Q86SG4 172 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 PEX5LQ8IYB4 626 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CACTIN-AS1Q8N1I8 211 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 OR6T1Q8NGN1 323 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 MAGEE2Q8TD90 523 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 PHF10Q8WUB8 498 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 TFAP2CQ92754 450 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 RMND5BQ96G75 393 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 WDR77Q9BQA1 342 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 MESP1Q9BRJ9 268 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 OSBPL11Q9BXB4 747 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 OR8D2Q9GZM6 311 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 GABARAPL1Q9H0R8 117 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 SMURF2Q9HAU4 748 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 Q9N2J8 555 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 TMEFF2Q9UIK5 374 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 C3orf18Q9UK00 162 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CBLCQ9ULV8 474 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 A4GNTQ9UNA3 340 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 ZNF443Q9Y2A4 671 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 LRCH1Q9Y2L9 728 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 PCDHGA3Q9Y5H0 932 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 AP4B1Q9Y6B7 739 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 U3KQV3 271 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 KNTC1P50748 2209 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CCDC187A0A096LP49 1063 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CENPVL1A0A0U1RR11 272 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 OR6C76A6NM76 312 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 TNFRSF11BO00300 401 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 TM4SF5O14894 197 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 TO15178 435 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 DLGAP3O95886 979 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 DBIP07108 87 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 NID1P14543 1247 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 IL7RP16871 459 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 SLC5A2P31639 672 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 HPCAP84074 193 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 MERTKQ12866 999 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 LARS2Q15031 903 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 EBPQ15125 230 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 ZNF141Q15928 474 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.16□□□□□ -0.78
ECM1-201ENST00000346569 KDM4DQ6B0I6 523 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 FAAH2Q6GMR7 532 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 TIPARPQ7Z3E1 657 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 CPEB2Q7Z5Q1 589 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 TSPYL5Q86VY4 417 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 CYP4Z1Q86W10 505 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 C9orf40Q8IXQ3 194 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 AMER2Q8N7J2 671 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 BCORP1Q8N888 145 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 ZNF441Q8N8Z8 693 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 APCDD1LQ8NCL9 501 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 PIK3C3Q8NEB9 887 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 LCORQ96JN0 433 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 RDH12Q96NR8 316 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 RBM4BQ9BQ04 359 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 FUZQ9BT04 418 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 DDA1Q9BW61 102 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 RBM4Q9BWF3 364 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 ULBP3Q9BZM4 244 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 NXF5Q9H1B4 397 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 REEP1Q9H902 201 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 NMNAT1Q9HAN9 279 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 NXT1Q9UKK6 140 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 SLC9A8Q9Y2E8 581 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 SAMHD1Q9Y3Z3 626 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 FAM32AQ9Y421 112 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 TESMINQ9Y4I5 508 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 PCDHGA10Q9Y5H3 936 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 NINQ8N4C6 2090 aa10.15□□□□□ -0.78
ECM1-201ENST00000346569 LOC102723996A0A087X1L8 192 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 IGHV3-20A0A0C4DH32 117 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 TEX51A0A1B0GUA7 166 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 PMS2P1A4D2B8 440 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 FRG2CA6NGY1 282 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 SAGE2PA6NJ88 616 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 CLDN24A6NM45 220 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 C9orf172C9J069 976 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 M0R3H8 397 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 PEX12O00623 359 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 PLD2O14939 933 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 E2F6O75461 281 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 STK17BO94768 372 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 UMODP07911 640 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 ARHGDIAP52565 204 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 ZNF136P52737 540 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 LIMK1P53667 647 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 ATP12AP54707 1039 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 ADARB1P78563 741 aaKnown RBP10.15□□□□□ -0.79
ECM1-201ENST00000346569 PLAURQ03405 335 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 EIF3IQ13347 325 aaKnown RBP10.15□□□□□ -0.79
ECM1-201ENST00000346569 MICAQ29983 383 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 SLC36A3Q495N2 470 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 FLYWCH1Q4VC44 716 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 C6orf52Q5T4I8 152 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 RNF220Q5VTB9 566 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 FAHD1Q6P587 224 aa10.15□□□□□ -0.79
ECM1-201ENST00000346569 ZNF836Q6ZNA1 936 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms