RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 EMC4Q5J8M3 183 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 OGFOD2Q6N063 350 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 CHMP1BQ7LBR1 199 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 YRDCQ86U90 279 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 RIMKLAQ8IXN7 391 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 ULK2Q8IYT8 1036 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 PIK3R3Q92569 461 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 STACQ99469 402 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 TIMP4Q99727 224 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 TTYH2Q9BSA4 534 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 ACTRT3Q9BYD9 372 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 PIGUQ9H490 435 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 KCNJ16Q9NPI9 418 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 DUSP22Q9NRW4 184 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 GIN1Q9NXP7 522 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 STOML1Q9UBI4 398 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 MARCOQ9UEW3 520 aaPredicted RBP14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 SLC6A5Q9Y345 797 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 MRPS18CQ9Y3D5 142 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 PCNX1Q96RV3 2341 aa14.37□□□□□ -0.11
TSPAN4-201ENST00000346501 HMGB1P1B2RPK0 211 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 RNASET2O00584 256 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 SCDO00767 359 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 KLF11O14901 512 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 SNNO75324 88 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 BMP7P18075 431 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 ENDOUP21128 410 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 S100A3P33764 101 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 DCTP40126 519 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 ZFP36L2P47974 494 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 NUP107P57740 925 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 CRYZQ08257 329 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 STX5Q13190 355 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 NHSL2Q5HYW2 709 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 HIST2H2BCQ6DN03 193 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 VASNQ6EMK4 673 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 OR5M10Q6IEU7 315 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 CDC73Q6P1J9 531 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 NCCRP1Q6ZVX7 275 aaPredicted RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 WDSUB1Q8N9V3 476 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 ZNF527Q8NB42 609 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 SLC16A11Q8NCK7 471 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 OR8J2Q8NGG1 315 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 OR4A15Q8NGL6 344 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 PSMA8Q8TAA3 256 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 FBXO30Q8TB52 745 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 PIWIL2Q8TC59 973 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 TESCQ96BS2 214 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 LRRC46Q96FV0 321 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 SFXN2Q96NB2 322 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 YIPF4Q9BSR8 244 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 BTBD2Q9BX70 525 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 OR2B2Q9GZK3 357 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 VIPAS39Q9H9C1 493 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 RNF6Q9Y252 685 aa14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 SPENQ96T58 3664 aaKnown RBP14.36□□□□□ -0.11
TSPAN4-201ENST00000346501 PRSS51A0A1B0GVH4 220 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 GXYLT2A0PJZ3 443 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 HSPB2A8KAH6 182 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 E9PBE3 544 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 H3BNH8 94 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 LINC01387J3KSC0 135 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 NDUFB5O43674 189 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 FADS1O60427 444 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 KCNK2O95069 426 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 IL2RAP01589 272 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 ACP2P11117 423 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 LRRC74AQ0VAA2 488 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 HSPB2Q16082 182 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 DUSP5Q16690 384 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 RIPPLY2Q5TAB7 128 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 OR4F3Q6IEY1 312 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 FIGNL1Q6PIW4 674 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 LACC1Q8IV20 430 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 MISPQ8IVT2 679 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 WDR75Q8IWA0 830 aaKnown RBP14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 TRIML2Q8N7C3 387 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 LILRB4Q8NHJ6 448 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 ZNF75CPQ92670 426 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 ARL8AQ96BM9 186 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 NTNG2Q96CW9 530 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 UGT2B28Q9BY64 529 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 PRDM14Q9GZV8 571 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 HOXD1Q9GZZ0 328 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 DSN1Q9H410 356 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 CXorf36Q9H7Y0 433 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 UBQLN4Q9NRR5 601 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 SIRT3Q9NTG7 399 aaPredicted RBP14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 HRH3Q9Y5N1 445 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 NAV2Q8IVL1 2488 aa14.35□□□□□ -0.11
TSPAN4-201ENST00000346501 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GOLGA8QA0A0J9YX86 632 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GOLGA8OA6NCC3 632 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 GOLGA8NF8WBI6 632 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 H0Y3Z8 333 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 SDHDO14521 159 aa14.34□□□□□ -0.11
TSPAN4-201ENST00000346501 ANGPTL1O95841 491 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms