RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ACTRT3Q9BYD9 372 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 DTX4Q9Y2E6 619 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 SNX5Q9Y5X3 404 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 SDK2Q58EX2 2172 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 CCDC187A0A096LP49 1063 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 C17orf105B2RV13 164 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 IDSB3KWA1 339 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 SLC22A1O15245 554 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 SLC34A2O95436 690 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 IFNA16P05015 189 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 BCHEP06276 602 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 BIKQ13323 160 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 DUSP5Q16690 384 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 RPS26P11Q5JNZ5 115 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 CDC73Q6P1J9 531 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 TIPARPQ7Z3E1 657 aaKnown RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF615Q8N8J6 731 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 GALNT6Q8NCL4 622 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF555Q8NEP9 628 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 NCLNQ969V3 563 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 MUL1Q969V5 352 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 FAM162AQ96A26 154 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 FKBP10Q96AY3 582 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 TMEM19Q96HH6 336 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 DDA1Q9BW61 102 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 CHID1Q9BWS9 393 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 LHPPQ9H008 270 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 PNO1Q9NRX1 252 aaKnown RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 V9GYQ6 96 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 A8MUA0 341 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 STK17BO94768 372 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 PRKD3O94806 890 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 DDAH2O95865 285 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 DLGAP3O95886 979 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 IGKV3-11P04433 115 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 CHRM4P08173 479 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 RAP2AP10114 183 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF24P17028 368 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 KHKP50053 298 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 PSG6Q00889 435 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 IL18R1Q13478 541 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
CXCL12-201ENST00000343575 MLIPQ5VWP3 458 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 HEPHL1Q6MZM0 1159 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 SLC44A2Q8IWA5 706 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-201ENST00000343575 SPARTQ8N0X7 666 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 ZSCAN1Q8NBB4 408 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 SENP5Q96HI0 755 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-201ENST00000343575 MUS81Q96NY9 551 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 C14orf105Q9NVL8 296 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 FOXJ2Q9P0K8 574 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 SATB2Q9UPW6 733 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 ERVK-19Q9WJR5 959 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 PCDHGA3Q9Y5H0 932 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 AHCTF1Q8WYP5 2266 aa13.64□□□□□ -0.23
CXCL12-201ENST00000343575 ASNA1O43681 348 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 UGT2B11O75310 529 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 GMNNO75496 209 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 KLF7O75840 302 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 CLIC3O95833 236 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 ALPLP05186 524 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 JMJD7P0C870 316 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 POLR2IP36954 125 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 PGDP52209 483 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 TARDBPQ13148 414 aaKnown RBP eCLIP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 EIF3IQ13347 325 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 ELAVL1Q15717 326 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 CRB2Q5IJ48 1285 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 C3orf38Q5JPI3 329 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 FAAH2Q6GMR7 532 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 REEP3Q6NUK4 255 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 CBLL1Q75N03 491 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF721Q8TF20 911 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 CDS1Q92903 461 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 VSTM2LQ96N03 204 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 SEPHS2Q99611 448 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 TREX2Q9BQ50 279 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 PELOQ9BRX2 385 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 CNPPD1Q9BV87 410 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 THUMPD1Q9NXG2 353 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 USE1Q9NZ43 259 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 PCDHGB1Q9Y5G3 927 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 PCDHGA8Q9Y5G5 932 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 M0QX08 132 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 OPN1SWP03999 348 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 KLK3P07288 261 aaPredicted RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 AGXTP21549 392 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 OPRL1P41146 370 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 GPR143P51810 404 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 SLC37A1P57057 533 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 DGUOKQ16854 277 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 C6orf141Q5SZD1 244 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 C16orf52Q8NHV5 167 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms