RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZNF443Q9Y2A4 671 aaPredicted RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 PTRH2Q9Y3E5 179 aaKnown RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 AGAP5A6NIR3 686 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 M0R3H8 397 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 ACOX3O15254 700 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 ZIC2O95409 532 aaPredicted RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 CLPSP04118 112 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 RHCEP18577 417 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 DCTP40126 519 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 CDH12P55289 794 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 GANABQ14697 944 aaKnown RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 DECR1Q16698 335 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 LIN52Q52LA3 116 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 EIPR1Q53HC9 387 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 SHQ1Q6PI26 577 aaKnown RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 CPEB2Q7Z5Q1 589 aaKnown RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 OR52J3Q8NH60 311 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 LPAR4Q99677 370 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 KIF17Q9P2E2 1029 aa16.06■□□□□ 0.16
CLDN4-201ENST00000340958 MRTO4Q9UKD2 239 aaKnown RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 GPR55Q9Y2T6 319 aaPredicted RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 MAGED1Q9Y5V3 778 aaPredicted RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 COL27A1Q8IZC6 1860 aaPredicted RBP16.06■□□□□ 0.16
CLDN4-201ENST00000340958 NPIPA5A0A0B4J1W7 369 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PMS2P1A4D2B8 440 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 NPIPA7E9PJI5 369 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 J3KTA2 159 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 KIAA0513O60268 411 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CNOT3O75175 753 aaKnown RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 DNAJB5O75953 348 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 LGI1O95970 557 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 IGKV3-11P04433 115 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 NPIPA8P0DM63 369 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CT45A8P0DMV1 189 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CT45A9P0DMV2 189 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 FPR1P21462 350 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PIGAP37287 484 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PPICP45877 212 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 DCAF7P61962 342 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 NCF4Q15080 339 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CT45A2Q5DJT8 189 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PAPD4Q6PIY7 484 aaKnown RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 HS3ST5Q8IZT8 346 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 TAGAPQ8N103 731 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PMM1Q92871 262 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 LCORQ96JN0 433 aaPredicted RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 BTBD9Q96Q07 612 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 RBM4BQ9BQ04 359 aaKnown RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 RBM4Q9BWF3 364 aaKnown RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PDP1Q9P0J1 537 aaPredicted RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 RHCGQ9UBD6 479 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 ORC6Q9Y5N6 252 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 KNTC1P50748 2209 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 FER1L5A0AVI2 2057 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PRAMEF25A6NGN4 478 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 SAGE2PA6NJ88 616 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 OR6C76A6NM76 312 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 H0YJX3 145 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 SYT5O00445 386 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PEX12O00623 359 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PRKNO60260 465 aaPredicted RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CYC1P08574 325 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CD63P08962 238 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 KRT20P35900 424 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 FOLR3P41439 243 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 ALDH3A2P51648 485 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 DAG1Q14118 895 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 LAPTM4AQ15012 233 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 CMPK2Q5EBM0 449 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 DHRS4L2Q6PKH6 230 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 TBPL2Q6SJ96 375 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 TMEM179BQ7Z7N9 219 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 MARCH9Q86YJ5 346 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 RBM45Q8IUH3 476 aaKnown RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 BCORP1Q8N888 145 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 B3GNT7Q8NFL0 401 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 PHF10Q8WUB8 498 aaKnown RBP16.05■□□□□ 0.16
CLDN4-201ENST00000340958 C8orf44Q96CB5 159 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 ZNF597Q96LX8 424 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 EPYCQ99645 322 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 SAP130Q9H0E3 1048 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 VNN3Q9NY84 501 aa16.05■□□□□ 0.16
CLDN4-201ENST00000340958 FRG2CA6NGY1 282 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 HS6ST1O60243 411 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 SEC24DO94855 1032 aaPredicted RBP16.04■□□□□ 0.16
CLDN4-201ENST00000340958 GADD45GO95257 159 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 THBS1P07996 1170 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 UQCRBP14927 111 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 PRKACGP22612 351 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 IFNA8P32881 189 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 RNF144AP50876 292 aaPredicted RBP16.04■□□□□ 0.16
CLDN4-201ENST00000340958 PSMD4P55036 377 aaKnown RBP16.04■□□□□ 0.16
CLDN4-201ENST00000340958 RGS8P57771 180 aaPredicted RBP16.04■□□□□ 0.16
CLDN4-201ENST00000340958 IL1RL1Q01638 556 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 C6orf52Q5T4I8 152 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 FAM198BQ6UWH4 519 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 HSDL2Q6YN16 418 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 LACC1Q8IV20 430 aa16.04■□□□□ 0.16
CLDN4-201ENST00000340958 SMURF2Q9HAU4 748 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms