RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TNFRSF21O75509 655 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 FAM153BP0C7A2 387 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 CD8BP10966 210 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 HK1P19367 917 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 MPIP34949 423 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 HSD17B3P37058 310 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 TPD52P55327 224 aaPredicted RBP14.08□□□□□ -0.16
LINC01116-202ENST00000339037 CLDN15P56746 228 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 CLCQ05315 142 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 ZNF155Q12901 538 aaPredicted RBP14.08□□□□□ -0.16
LINC01116-202ENST00000339037 STX5Q13190 355 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 GANABQ14697 944 aaKnown RBP14.08□□□□□ -0.16
LINC01116-202ENST00000339037 RASA2Q15283 850 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 FAM153CQ494X1 144 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 UNC50Q53HI1 259 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 SPIN4Q56A73 249 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 PRIMA1Q86XR5 153 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 FAM9CQ8IZT9 166 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 OR7G2Q8NG99 324 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 ZC3HAV1LQ96H79 300 aaKnown RBP14.08□□□□□ -0.16
LINC01116-202ENST00000339037 TMEM237Q96Q45 408 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 PIGQQ9BRB3 760 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 STMN4Q9H169 189 aaPredicted RBP14.08□□□□□ -0.16
LINC01116-202ENST00000339037 DSN1Q9H410 356 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 RNF122Q9H9V4 155 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 SLC35C2Q9NQQ7 365 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 ABCG2Q9UNQ0 655 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 ZNF175Q9Y473 711 aa14.08□□□□□ -0.16
LINC01116-202ENST00000339037 H3BML4 177 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 LINC01387J3KSC0 135 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
LINC01116-202ENST00000339037 DLX3O60479 287 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 COQ9O75208 318 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ULK1O75385 1050 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 SUPT7LO94864 414 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 CGAP01215 116 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 CHN1P15882 459 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 SUCLG1P53597 346 aaKnown RBP14.07□□□□□ -0.16
LINC01116-202ENST00000339037 RAE1P78406 368 aaKnown RBP14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ACSM2AQ08AH3 577 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 PON3Q15166 354 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 SH2D4BQ5SQS7 431 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ZNF678Q5SXM1 525 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ACSM2BQ68CK6 577 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 TIFABQ6ZNK6 161 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 TRMT10CQ7L0Y3 403 aaKnown RBP14.07□□□□□ -0.16
LINC01116-202ENST00000339037 IFT20Q8IY31 132 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 DEPDC4Q8N2C3 294 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 OR2M3Q8NG83 312 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 PPP1R14CQ8TAE6 165 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 CAVIN3Q969G5 261 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 MARK4Q96L34 752 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 BBS4Q96RK4 519 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ZNF382Q96SR6 550 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ACPTQ9BZG2 426 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 SHCBP1LQ9BZQ2 653 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 PTGES2Q9H7Z7 377 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 SDHAF3Q9NRP4 125 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 MED11Q9P086 117 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 ZNF337Q9Y3M9 751 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 PCNX3Q9H6A9 2034 aa14.07□□□□□ -0.16
LINC01116-202ENST00000339037 USF3Q68DE3 2245 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 OR2M5A3KFT3 312 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 KIAA1324LA8MWY0 1029 aaPredicted RBP14.06□□□□□ -0.16
LINC01116-202ENST00000339037 GOLGA8RI6L899 631 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 FADS1O60427 444 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 FCGR2AP12318 317 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 TAC1P20366 129 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 HMOX2P30519 316 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 TIA1P31483 386 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC01116-202ENST00000339037 CLDN20P56880 219 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 PPP2R2BQ00005 443 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 PSG6Q00889 435 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 LGSNQ5TDP6 509 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 GPRIN3Q6ZVF9 776 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 GSPT2Q8IYD1 628 aaKnown RBP14.06□□□□□ -0.16
LINC01116-202ENST00000339037 CEP112Q8N8E3 955 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 ZNF610Q8N9Z0 462 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 PLPP7Q8NBV4 271 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 OR5M1Q8NGP8 315 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 KIF18AQ8NI77 898 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 METTL6Q8TCB7 284 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 C16orf78Q8WTQ4 265 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 MZB1Q8WU39 189 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 GFM2Q969S9 779 aaKnown RBP14.06□□□□□ -0.16
LINC01116-202ENST00000339037 C1GALT1C1Q96EU7 318 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 RHOXF2Q9BQY4 288 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 TXLNGYQ9BZA5 131 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 GSX2Q9BZM3 304 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 PROCRQ9UNN8 238 aa14.06□□□□□ -0.16
LINC01116-202ENST00000339037 DSCAMO60469 2012 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 UQCRHLA0A096LP55 91 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 HTR6P50406 440 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 RPS3AP61247 264 aaKnown RBP14.05□□□□□ -0.16
LINC01116-202ENST00000339037 OCRLQ01968 901 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 SLC29A2Q14542 456 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 GUSBP1Q15486 140 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 DECR1Q16698 335 aa14.05□□□□□ -0.16
LINC01116-202ENST00000339037 EXOC3L2Q2M3D2 409 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms