RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TNFSF13O75888 250 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 IL18BPO95998 194 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 ACP2P11117 423 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 CHMP24386 653 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 NTSP30990 170 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GCKP35557 465 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GSTM5P46439 218 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 RNF144AP50876 292 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 DSCR4P56555 118 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 DECR1Q16698 335 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GRAMD1BQ3KR37 738 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 ARL13AQ5H913 290 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 VWA1Q6PCB0 445 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 AAGABQ6PD74 315 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 BTLAQ7Z6A9 289 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GRAMD2AQ8IUY3 354 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 BANPQ8N9N5 519 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GATSQ8NAP1 163 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 NUP43Q8NFH3 380 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GOT1L1Q8NHS2 421 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 AGR3Q8TD06 166 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GPR151Q8TDV0 419 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 SMPDL3BQ92485 455 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 STARD4Q96DR4 205 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 RMND5BQ96G75 393 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 C3orf30Q96M34 536 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 FAM111AQ96PZ2 611 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 LMF2Q9BU23 707 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 REEP4Q9H6H4 257 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 L2HGDHQ9H9P8 463 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 GALNT8Q9NY28 637 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 TRAF6Q9Y4K3 522 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 ZFHX3Q15911 3703 aa12.07□□□□□ -0.48
NUDCD3-201ENST00000338427 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 A0A1W2PNV4 684 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 OR2M5A3KFT3 312 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 A8MXE2 369 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 PDPK1O15530 556 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 SEC14L5O43304 696 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 ANGPTL1O95841 491 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 PRPS2P11908 318 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 BCKDHAP12694 445 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 PRPH2P23942 346 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 GPC1P35052 558 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 MAP3K8P41279 467 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 MANFP55145 182 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 VSNL1P62760 191 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 RPL38P63173 70 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 SIRPAP78324 504 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 MRPS22P82650 360 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 RAET1LQ5VY80 246 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 FIGNL1Q6PIW4 674 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 P4HA3Q7Z4N8 544 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 KIF18BQ86Y91 864 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 EIF1ADQ8N9N8 165 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 SLC16A11Q8NCK7 471 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 SLC9A6Q92581 669 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 GIMAP5Q96F15 307 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 LRRC46Q96FV0 321 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 FCRL1Q96LA6 429 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 TM9SF2Q99805 663 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 OPN3Q9H1Y3 402 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 Q9N2J8 555 aa12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 FOXD3Q9UJU5 478 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 WBP11Q9Y2W2 641 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-201ENST00000338427 H3BML4 177 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 PIP5K1BO14986 540 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 LSM1O15116 133 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 HCRTR2O43614 444 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 PEX11AO75192 247 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 SMNDC1O75940 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 NKX2-2O95096 273 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 FGF4P08620 206 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 PEPDP12955 493 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 CD1EP15812 388 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 KIR2DL2P43627 348 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 CPA2P48052 419 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 BCL2A1Q16548 175 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 CCNJQ5T5M9 372 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 FBXW10Q5XX13 1052 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 KANK2Q63ZY3 851 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 ZNF474Q6S9Z5 364 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 C22orf34Q6ZV56 151 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 CHMP1BQ7LBR1 199 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 SZRD1Q7Z422 152 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 TRABD2AQ86V40 505 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 DDIASQ8IXT1 998 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 CNEP1R1Q8N9A8 125 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 OR7A2PQ8NGA2 310 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 PPCDCQ96CD2 204 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 C1GALT1C1Q96EU7 318 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 WFIKKN1Q96NZ8 548 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 TMUB1Q9BVT8 246 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms