RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ACOT11Q8WXI4 607 aaPredicted RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 ZFYVE21Q9BQ24 234 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 KATNBL1Q9H079 304 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 CXXC1Q9P0U4 656 aaPredicted RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 GLI3P10071 1580 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 KIAA0100Q14667 2235 aaKnown RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 OR7A17O14581 309 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 APBB3O95704 486 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 CASRP41180 1078 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 CHRFAM7AQ494W8 412 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 PODNL1Q6PEZ8 512 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 SLC7A5P1Q8MH63 180 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 OR4C15Q8NGM1 316 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 SPRYD4Q8WW59 207 aaPredicted RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 MUL1Q969V5 352 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 MACROD1Q9BQ69 325 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 KLHL21Q9UJP4 597 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ASB4Q9Y574 426 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 KIAA0355O15063 1070 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ADAM12O43184 909 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 JUNDP17535 347 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 HTR2AP28223 471 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ACTBP60709 375 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ACTG1P63261 375 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ZNF91Q05481 1191 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 LEXMQ3ZCV2 418 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 C6orf132Q5T0Z8 1188 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 LRRC69Q6ZNQ3 347 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 PDZD9Q8IXQ8 264 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 TBC1D15Q8TC07 691 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 WDR77Q9BQA1 342 aaPredicted RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 CLSTN3Q9BQT9 956 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 DDX31Q9H8H2 851 aaKnown RBP12.98□□□□□ -0.33
RTN4-202ENST00000337526 SFXN1Q9H9B4 322 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 IL37Q9NZH6 218 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
RTN4-202ENST00000337526 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 CSNK1DP48730 415 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 HNRNPA1L2Q32P51 320 aaKnown RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 BCL7AQ4VC05 210 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 PELI3Q8N2H9 469 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 TOR1AIP2Q8NFQ8 470 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 SLC46A2Q9BY10 475 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 CD300AQ9UGN4 299 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 APOBEC3BQ9UH17 382 aaKnown RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 FAM221BA6H8Z2 402 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 CLEC3AO75596 197 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 GALK2Q01415 458 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 ARHGAP19Q14CB8 494 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 SF3A2Q15428 464 aaKnown RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 SYPL1Q16563 259 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 KIF18BQ86Y91 864 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 OR5AK2Q8NH90 309 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 CD300LFQ8TDQ1 290 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 POT1Q9NUX5 634 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 PAHP00439 452 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 AMY2AP04746 511 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 TIMP2P16035 220 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 BMPR1AP36894 532 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 TMEM164Q5U3C3 297 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 ADAMTS16Q8TE57 1224 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 THAP7Q9BT49 309 aaPredicted RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 GPR174Q9BXC1 333 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 TCRBV21S2A2A0A5A6 115 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 POLR1CO15160 346 aaPredicted RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 C1orf105O95561 183 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 CHMP24386 653 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 PRSS3P35030 304 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 AHRP35869 848 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 DAPP51397 102 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 FGL1Q08830 312 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 RAB11BQ15907 218 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 PTRH1Q86Y79 214 aaKnown RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 DNAJC22Q8N4W6 341 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 OR8J2Q8NGG1 315 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 DEFB126Q9BYW3 111 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 ATXN7L1Q9ULK2 861 aaPredicted RBP12.97□□□□□ -0.33
RTN4-202ENST00000337526 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
RTN4-202ENST00000337526 J3KTA2 159 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 FBXO45P0C2W1 286 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 ARAFP10398 606 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 ITGB7P26010 798 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 HLA-FP30511 346 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 ACSM3Q53FZ2 586 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 SBSNQ6UWP8 590 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms