RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 DGCR6Q14129 220 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 DOC2AQ14183 400 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 TSPAN33Q86UF1 283 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ALYREFQ86V81 257 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 C1orf87Q8N0U7 546 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ARMC10Q8N2F6 343 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 PQLC1Q8N2U9 271 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 BRIX1Q8TDN6 353 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 MSI2Q96DH6 328 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ANKRA2Q9H9E1 313 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 BTNL2Q9UIR0 455 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 NAALAD2Q9Y3Q0 740 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 PCDHA9Q9Y5H5 950 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 A0A087WZY1 265 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 A0A1W2PP18 115 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CREB1P16220 341 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 TEAD1P28347 426 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 HOXC8P31273 242 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 EIF1AXP47813 144 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CORO7P57737 925 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 RAB31Q13636 194 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 LTB4RQ15722 352 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 LRIT3Q3SXY7 679 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 XKR5Q6UX68 686 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 POGLUT1Q8NBL1 392 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 OR13C3Q8NGS6 347 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 FAM46BQ96A09 425 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 RTP4Q96DX8 246 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 THOC3Q96J01 351 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CPPED1Q9BRF8 314 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 SCP2D1Q9UJQ7 156 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 USP22Q9UPT9 525 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 DVL2O14641 736 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 PLOD3O60568 738 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 SLC19A2O60779 497 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CD68P34810 354 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CLDN2P57739 230 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ZIK1Q3SY52 487 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 CYBRD1Q53TN4 286 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 FCRL6Q6DN72 434 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 BOLLQ8N9W6 283 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 RCBTB1Q8NDN9 531 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 OR52J3Q8NH60 311 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 OR5AK3PQ8NH89 298 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 FCRL3Q96P31 734 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 PIP5K1AQ99755 562 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 PAPOLGQ9BWT3 736 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 TBCCD1Q9NVR7 557 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ZNF226Q9NYT6 803 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 KCNN3Q9UGI6 736 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 EGFL7Q9UHF1 273 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 A0A1W2PPC4 97 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ANKRD34BA5PLL1 514 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 LILRA5A6NI73 299 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ZNF814B7Z6K7 855 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 EEF1E1-BLOC1S5C9J1V9 151 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 hCG_2039718K7EN88 272 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 EEF1E1O43324 174 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 RDH16O75452 317 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 LCKP06239 509 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 GKN3PP0CG01 181 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 RHCEP18577 417 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 FRKP42685 505 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 SLC9A3P48764 834 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 RUNX2Q13950 521 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ZNF648Q5T619 568 aaPredicted RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 GFRALQ6UXV0 394 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 LINGO2Q7L985 606 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 ZNF781Q8N8C0 355 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 MORN4Q8NDC4 146 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 LRRC58Q96CX6 371 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 TMEM80Q96HE8 168 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 HES7Q9BYE0 225 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 KLHL9Q9P2J3 617 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 FARSAQ9Y285 508 aaKnown RBP6.93□□□□□ -1.3
EPHA3-201ENST00000336596 PSAT1Q9Y617 370 aa6.93□□□□□ -1.3
EPHA3-201ENST00000336596 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 SIX3O95343 332 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-201ENST00000336596 GPR75O95800 540 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 KLKB1P03952 638 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 IL1RNP18510 177 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 GALNT1Q10472 559 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-201ENST00000336596 CBLBQ13191 982 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 DEFB109BQ30KR1 87 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 SFT2D3Q587I9 215 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 FAM180BQ6P0A1 224 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 TMEM71Q6P5X7 295 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 RANBP10Q6VN20 620 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 RNF175Q8N4F7 328 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-201ENST00000336596 OR4N2Q8NGD1 307 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 TNFAIP8L1Q8WVP5 186 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 ASB17Q8WXJ9 295 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
EPHA3-201ENST00000336596 S100A16Q96FQ6 103 aaKnown RBP6.92□□□□□ -1.3
EPHA3-201ENST00000336596 AIFM2Q9BRQ8 373 aa6.92□□□□□ -1.3
EPHA3-201ENST00000336596 FGF21Q9NSA1 209 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms