RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 SPATA9Q9BWV2 254 aa11.09□□□□□ -0.63
LCE4A-201ENST00000335535 RAD21L1Q9H4I0 556 aa11.09□□□□□ -0.63
LCE4A-201ENST00000335535 TMEM38AQ9H6F2 299 aa11.09□□□□□ -0.63
LCE4A-201ENST00000335535 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
LCE4A-201ENST00000335535 C3orf14Q9HBI5 128 aa11.09□□□□□ -0.63
LCE4A-201ENST00000335535 ZCCHC3Q9NUD5 404 aaKnown RBP11.09□□□□□ -0.63
LCE4A-201ENST00000335535 GMPR2Q9P2T1 348 aaKnown RBP11.09□□□□□ -0.63
LCE4A-201ENST00000335535 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.09□□□□□ -0.63
LCE4A-201ENST00000335535 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
LCE4A-201ENST00000335535 SLC7A8Q9UHI5 535 aa11.09□□□□□ -0.63
LCE4A-201ENST00000335535 EVPLLA8MZ36 301 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 FAM220BPB1ANY3 271 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 HRKO00198 91 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 ASNA1O43681 348 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 OR10H2O60403 315 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 SOX30O94993 753 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 RASAL1O95294 804 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 ANP32DO95626 131 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 HMGN2P05204 90 aaKnown RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 HEXBP07686 556 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 GUSBP08236 651 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 NT5EP21589 574 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 GPC1P35052 558 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 SLC37A1P57057 533 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 MS4A2Q01362 244 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 TRAP1Q12931 704 aaKnown RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 COX20Q5RI15 118 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 MFSD12Q6NUT3 480 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 LANCL3Q6ZV70 420 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 TMEM200AQ86VY9 491 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 DMRTC2Q8IXT2 367 aaPredicted RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 PRSS58Q8IYP2 241 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 LGI4Q8N135 537 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 NUP43Q8NFH3 380 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 OR52E4Q8NGH9 312 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 OR5AK3PQ8NH89 298 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 REXO5Q96IC2 774 aaKnown RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 IMMP1LQ96LU5 166 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 VSTM2LQ96N03 204 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 MS4A4EQ96PG1 132 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 MESP1Q9BRJ9 268 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 LMF2Q9BU23 707 aaKnown RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 CRB3Q9BUF7 120 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 THUMPD3Q9BV44 507 aaKnown RBP11.08□□□□□ -0.64
LCE4A-201ENST00000335535 ZNF700Q9H0M5 742 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 ANKRA2Q9H9E1 313 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 ST6GALNAC2Q9UJ37 374 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 SCN2AQ99250 2005 aa11.08□□□□□ -0.64
LCE4A-201ENST00000335535 PRAMEF27A3QJZ7 478 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 SAGE2PA6NJ88 616 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 TTC36A6NLP5 189 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 C17orf105B2RV13 164 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 HMGN4O00479 90 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 PRAMEF2O60811 474 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 NKX2-2O95096 273 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 HEXAP06865 529 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 TFPTP0C1Z6 253 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ARAFP10398 606 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ME2P23368 584 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 OR4D2P58180 307 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 TFF3Q07654 80 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 RBBP4Q09028 425 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 VEZF1Q14119 521 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 TRIM25Q14258 630 aaKnown RBP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 SFT2D3Q587I9 215 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 CDC73Q6P1J9 531 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 SHISA6Q6ZSJ9 500 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 CPEB2Q7Z5Q1 589 aaKnown RBP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 RNF130Q86XS8 419 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 SPPL2CQ8IUH8 684 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ZZZ3Q8IYH5 903 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ARMC10Q8N2F6 343 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 METTL25Q8N6Q8 603 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 HORMAD2Q8N7B1 307 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ZNF441Q8N8Z8 693 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 APCDD1LQ8NCL9 501 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 OR11G2Q8NGC1 345 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 OR10A6Q8NH74 314 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 DAZLQ92904 295 aaKnown RBP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 C16orf58Q96GQ5 468 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 MAGED4Q96JG8 741 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 DMRTA2Q96SC8 542 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 SMR3AQ99954 134 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ECSITQ9BQ95 431 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ZNF559Q9BR84 538 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ACTRT3Q9BYD9 372 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 RNF32Q9H0A6 362 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 ALG2Q9H553 416 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 A4GALTQ9NPC4 353 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 DUSP22Q9NRW4 184 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 DDX18Q9NVP1 670 aaKnown RBP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 THUMPD1Q9NXG2 353 aaKnown RBP11.07□□□□□ -0.64
LCE4A-201ENST00000335535 L3MBTL1Q9Y468 752 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 SNX8Q9Y5X2 465 aa11.07□□□□□ -0.64
LCE4A-201ENST00000335535 HRNRQ86YZ3 2850 aaPredicted RBP11.06□□□□□ -0.64
LCE4A-201ENST00000335535 COQ9O75208 318 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms