RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 EXTL1Q92935 676 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 EFHD1Q9BUP0 239 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 ZNF552Q9H707 407 aaPredicted RBP15.2■□□□□ 0.02
SHOX-201ENST00000334060 ATP13A2Q9NQ11 1180 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 DUSP22Q9NRW4 184 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 CHST2Q9Y4C5 530 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 FAM220BPB1ANY3 271 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 ADAM10O14672 748 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 ICOSLGO75144 302 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 TNFRSF1BP20333 461 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 DRD5P21918 477 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 MLF1P58340 268 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 POU6F2P78424 691 aaPredicted RBP15.2■□□□□ 0.02
SHOX-201ENST00000334060 CDK6Q00534 326 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 PLCXD2Q0VAA5 305 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 FADDQ13158 208 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 ACER2Q5QJU3 275 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 HLA-DQA1Q5Y7H0 255 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 H3F3CQ6NXT2 135 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 MICU2Q8IYU8 434 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 GATSQ8NAP1 163 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 HIPK4Q8NE63 616 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 OR10G3Q8NGC4 313 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 NODALQ96S42 347 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 TREX2Q9BQ50 279 aaPredicted RBP15.2■□□□□ 0.02
SHOX-201ENST00000334060 COMMD3-BMI1R4GMX3 469 aa15.2■□□□□ 0.02
SHOX-201ENST00000334060 A0A0G2JMM0 328 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 A0A1W2PPB8 328 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 A0A1W2PRS3 328 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 OR6C76A6NM76 312 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 KIR3DP1A8MWS1 328 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 RRP8O43159 456 aaKnown RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 TPST1O60507 370 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 BCAS2O75934 225 aaPredicted RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 EPPINO95925 133 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 IFI6P09912 130 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 NR2F1P10589 423 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 CYP4B1P13584 511 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 TRHRP34981 398 aaPredicted RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 AIMP2Q13155 320 aaKnown RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 BHLHB9Q6PI77 547 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 IL20RBQ6UXL0 311 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 C16orf62Q7Z3J2 963 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 VRK2Q86Y07 508 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 FBXW8Q8N3Y1 598 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 SMYD1Q8NB12 490 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 THAP4Q8WY91 577 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 REXO5Q96IC2 774 aaKnown RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 SIGLEC12Q96PQ1 595 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 STACQ99469 402 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 Q9N2J8 555 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 A4GALTQ9NPC4 353 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 NPFFR2Q9Y5X5 522 aa15.19■□□□□ 0.02
SHOX-201ENST00000334060 PRRC2CQ9Y520 2896 aaKnown RBP15.19■□□□□ 0.02
SHOX-201ENST00000334060 CPAMD8Q8IZJ3 1885 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 A0A087WV48 116 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ELOVL7A1L3X0 281 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ARPC2O15144 300 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 TSPAN2O60636 221 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 REM1O75628 298 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 PGM3O95394 542 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ARHGAP11BQ3KRB8 267 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 DNAL1Q4LDG9 190 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 C19orf48Q6RUI8 117 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 TMEM102Q8N9M5 508 aaPredicted RBP15.18■□□□□ 0.02
SHOX-201ENST00000334060 TAMM41Q96BW9 452 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ZNF524Q96C55 264 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 FER1L6-AS2Q96M78 137 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 BTBD2Q9BX70 525 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 FAM117AQ9C073 453 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ZNF350Q9GZX5 532 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 LHPPQ9H008 270 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 GALNT9Q9HCQ5 603 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 RLIMQ9NVW2 624 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ZMIZ1Q9ULJ6 1067 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ATRXP46100 2492 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 C15orf38-AP3S2A0A0A6YYH1 394 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ACOT8O14734 319 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 OIP5O43482 229 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 FRS3O43559 492 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 GMFGO60234 142 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 WISP1O95388 367 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 WDPCPO95876 746 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 HSD17B1P14061 328 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 FUT4P22083 530 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 SLC34A1Q06495 639 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ZNHIT3Q15649 155 aaPredicted RBP15.18■□□□□ 0.02
SHOX-201ENST00000334060 CD226Q15762 336 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 GRAMD1BQ3KR37 738 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 SAMD4BQ5PRF9 694 aaKnown RBP15.18■□□□□ 0.02
SHOX-201ENST00000334060 PRAMEF20Q5VT98 475 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 SPINK14Q6IE38 97 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 ARPINQ7Z6K5 226 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 SPPL2CQ8IUH8 684 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 CHDHQ8NE62 594 aaPredicted RBP15.18■□□□□ 0.02
SHOX-201ENST00000334060 CATSPER1Q8NEC5 780 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 OR8K3Q8NH51 312 aa15.18■□□□□ 0.02
SHOX-201ENST00000334060 MCUR1Q96AQ8 359 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms