RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PRDX1Q06830 199 aaKnown RBP11.52□□□□□ -0.56
VPS33B-201ENST00000333371 TSPAN31Q12999 210 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 FZD5Q13467 585 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 DUSP6Q16828 381 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 GAB4Q2WGN9 574 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 C6orf132Q5T0Z8 1188 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 FAM27D1Q5T7N8 215 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 OR51G2Q8NGK0 314 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 GNPDA2Q8TDQ7 276 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SMAP2Q8WU79 429 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-201ENST00000333371 COL26A1Q96A83 441 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 MS4A6EQ96DS6 147 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SLC38A2Q96QD8 506 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 WACQ9BTA9 647 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 MED18Q9BUE0 208 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SLC6A20Q9NP91 592 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 PRDM7Q9NQW5 492 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 MRPS18AQ9NVS2 196 aaKnown RBP11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SERGEFQ9UGK8 458 aa11.52□□□□□ -0.56
VPS33B-201ENST00000333371 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.56
VPS33B-201ENST00000333371 DENND4AQ7Z401 1863 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 SYNDIG1LA6NDD5 238 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 ISM1B1AKI9 464 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 SURF4O15260 269 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 HYAL3O43820 417 aaPredicted RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 PAK4O96013 591 aaPredicted RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 GSTM3P21266 225 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 HIST1H1TP22492 207 aaPredicted RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 AHRP35869 848 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 ERVK-21P61565 698 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 ARHGAP19Q14CB8 494 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 MLC1Q15049 377 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM52BQ4KMG9 183 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 C9orf50Q5SZB4 431 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 KIAA1211LQ6NV74 962 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM91Q6ZNR0 172 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 YAF2Q8IY57 180 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 NATD1Q8N6N6 113 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 NUP43Q8NFH3 380 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 PINK1Q9BXM7 581 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 ENKD1Q9H0I2 346 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 PPIL3Q9H2H8 161 aaKnown RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 GALNT9Q9HCQ5 603 aa11.52□□□□□ -0.57
VPS33B-201ENST00000333371 HINT3Q9NQE9 182 aaKnown RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 EXOSC1Q9Y3B2 195 aaKnown RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 MUC22E2RYF6 1773 aaPredicted RBP11.52□□□□□ -0.57
VPS33B-201ENST00000333371 FAM240BA0A1B0GVZ2 78 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 LYRM1O43325 122 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 LANCL1O43813 399 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 CLEC3AO75596 197 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 DRD2P14416 443 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 TBXA2RP21731 343 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 ATP5A1P25705 553 aaKnown RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 FGF9P31371 208 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 EVX1P49640 407 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 RPA4Q13156 261 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 EOGTQ5NDL2 527 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 AADACL4Q5VUY2 407 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 CD200R1LQ6Q8B3 271 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 FAM111BQ6SJ93 734 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 SMARCD3Q6STE5 483 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 CPOQ8IVL8 374 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 GALNT6Q8NCL4 622 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 AP3S1Q92572 193 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 SAMD8Q96LT4 415 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 CAMK1GQ96NX5 476 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 SPATA5L1Q9BVQ7 753 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 RPRD1BQ9NQG5 326 aaKnown RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 GDE1Q9NZC3 331 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 SLC13A4Q9UKG4 626 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 A0A0G2JMP0 313 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 A0A0G2JPF8 293 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 A0A0X1KG70 313 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 HNRNPCL2B2RXH8 293 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 HNRNPCL3B7ZW38 293 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 HNRNPCL4P0DMR1 293 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 ELK1P19419 428 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 AGFG1P52594 562 aaKnown RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 RGS8P57771 180 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 PPP3R1P63098 170 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 GPLD1P80108 840 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 CSTF1Q05048 431 aaKnown RBP11.51□□□□□ -0.57
VPS33B-201ENST00000333371 TGM3Q08188 693 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 TRAM2Q15035 370 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 TANGO2Q6ICL3 276 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 ABHD17CQ6PCB6 329 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 PLEKHM3Q6ZWE6 761 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 MRGPREQ86SM8 312 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 OR4N5Q8IXE1 308 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 SLC16A11Q8NCK7 471 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 OR4M2Q8NGB6 313 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 SOSTQ9BQB4 213 aa11.51□□□□□ -0.57
VPS33B-201ENST00000333371 FAIM2Q9BWQ8 316 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms