RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MTNR1BP49286 362 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 HTRA3P83110 453 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 DBPQ10586 325 aaPredicted RBP22.11■■□□□ 1.13
TSKU-201ENST00000333090 ZNF750Q32MQ0 723 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 LY6G5CQ5SRR4 150 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 ZNF697Q5TEC3 545 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 SMARCD3Q6STE5 483 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 UBE3DQ7Z6J8 389 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 VRK2Q86Y07 508 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 NKAIN4Q8IVV8 208 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 LRRC20Q8TCA0 184 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 OSTF1Q92882 214 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 C16orf58Q96GQ5 468 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 CAMK1GQ96NX5 476 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 GHITMQ9H3K2 345 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 SLC35C2Q9NQQ7 365 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 RASD1Q9Y272 281 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 NTNG1Q9Y2I2 539 aa22.11■■□□□ 1.13
TSKU-201ENST00000333090 PCYT1BQ9Y5K3 369 aaPredicted RBP22.11■■□□□ 1.13
TSKU-201ENST00000333090 PRR23AA6NEV1 266 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 PDGFAP04085 211 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 CXCL3P19876 107 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 PRKACBP22694 351 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 SSR2P43308 183 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 CPOQ8IVL8 374 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 NUP210Q8TEM1 1887 aaPredicted RBP22.1■■□□□ 1.13
TSKU-201ENST00000333090 MYO10Q9HD67 2058 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 I3L521 148 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 TGM5O43548 720 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 ANXA3P12429 323 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 AHCYP23526 432 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 ACSL1P33121 698 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 TRHRP34981 398 aaPredicted RBP22.1■■□□□ 1.13
TSKU-201ENST00000333090 CCR8P51685 355 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 OR10A3P58181 314 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 RGS1Q08116 209 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 ST3GAL3Q11203 375 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 COL9A2Q14055 689 aaPredicted RBP22.1■■□□□ 1.13
TSKU-201ENST00000333090 PGGHGQ32M88 737 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 RNASE12Q5GAN4 147 aaKnown RBP22.1■■□□□ 1.13
TSKU-201ENST00000333090 ADCK2Q7Z695 626 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 NRMQ8IXM6 262 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 OR6C4Q8NGE1 309 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 PCNPQ8WW12 178 aaKnown RBP22.1■■□□□ 1.13
TSKU-201ENST00000333090 DIO2Q92813 273 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 SCMH1Q96GD3 660 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 COQ10AQ96MF6 247 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 ABHD1Q96SE0 405 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 OR52A5Q9H2C5 316 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 EQTNQ9NQ60 294 aa22.1■■□□□ 1.13
TSKU-201ENST00000333090 HINT3Q9NQE9 182 aaKnown RBP22.1■■□□□ 1.13
TSKU-201ENST00000333090 LOC105369274A0A096LPK9 316 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 LINC00862A6NCI5 91 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 SYPP08247 313 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 SDHBP21912 280 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 OAFQ86UD1 273 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 OR4N4Q8N0Y3 316 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 OR2L2Q8NH16 312 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 HSD17B8Q92506 261 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 TFGQ92734 400 aaPredicted RBP22.09■■□□□ 1.13
TSKU-201ENST00000333090 UCKL1Q9NWZ5 548 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 SLCO1C1Q9NYB5 712 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 MRPL39Q9NYK5 338 aaKnown RBP22.09■■□□□ 1.13
TSKU-201ENST00000333090 A0A0G2JPF8 293 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 C7orf66A4D0T2 115 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 HNRNPCL2B2RXH8 293 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 HNRNPCL3B7ZW38 293 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 RAF1P04049 648 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 HNRNPCL4P0DMR1 293 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 NTSP30990 170 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 TAS2R38P59533 333 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 MLC1Q15049 377 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 TMEM44Q2T9K0 475 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 DCUN1D3Q8IWE4 304 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 ZNF296Q8WUU4 475 aaPredicted RBP22.09■■□□□ 1.13
TSKU-201ENST00000333090 EMC7Q9NPA0 242 aa22.09■■□□□ 1.13
TSKU-201ENST00000333090 ENPP1P22413 925 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 RBMS1P29558 406 aaKnown RBP22.08■■□□□ 1.13
TSKU-201ENST00000333090 AHRP35869 848 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 CCR2P41597 374 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 GNA13Q14344 377 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 POU4F3Q15319 338 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 ARHGAP15Q53QZ3 475 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 GLRX5Q86SX6 157 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 CCDC116Q8IYX3 515 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 ZFPM2Q8WW38 1151 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 NUS1Q96E22 293 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 OR51J1Q9H342 316 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 DPAGT1Q9H3H5 408 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 PELI2Q9HAT8 420 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 SPHK2Q9NRA0 654 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 HCFC1R1Q9NWW0 138 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 IL20Q9NYY1 176 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 DENND4CQ5VZ89 1909 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 ZC3H12DA2A288 527 aaKnown RBP22.08■■□□□ 1.13
TSKU-201ENST00000333090 C8orf89P0DMQ9 161 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 PAICSP22234 425 aaKnown RBP22.08■■□□□ 1.13
TSKU-201ENST00000333090 SRP54P61011 504 aaKnown RBP22.08■■□□□ 1.13
TSKU-201ENST00000333090 FGFBP1Q14512 234 aa22.08■■□□□ 1.13
TSKU-201ENST00000333090 ARHGEF6Q15052 776 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms