RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PCNX1Q96RV3 2341 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 A0A0A6YYD5 115 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 A0A1W2PQM1 296 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 SRPX2O60687 465 aaPredicted RBP14.82□□□□□ -0.04
PDGFB-201ENST00000331163 CCNKO75909 580 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 MED26O95402 600 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 CENPAP49450 140 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 TMPRSS9Q7Z410 1059 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 P2RY8Q86VZ1 359 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 PEX5LQ8IYB4 626 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF540Q8NDQ6 660 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF563Q8TA94 476 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 OR7D2Q96RA2 312 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 C11orf16Q9NQ32 467 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 C3orf18Q9UK00 162 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 PNMA8CA0A1B0GUJ8 204 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 FAM47E-STBD1D6RA91 191 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 CDC40O60508 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDGFB-201ENST00000331163 UGT2B17O75795 530 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 RPS18P62269 152 aaKnown RBP14.82□□□□□ -0.04
PDGFB-201ENST00000331163 TARDBPQ13148 414 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDGFB-201ENST00000331163 NKG7Q16617 165 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 C10orf62Q5T681 223 aaPredicted RBP14.82□□□□□ -0.04
PDGFB-201ENST00000331163 CMKLR1Q99788 373 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 TUBA1CQ9BQE3 449 aa14.82□□□□□ -0.04
PDGFB-201ENST00000331163 TRIM64CA6NLI5 447 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 GRK6P43250 576 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 DUSP3P51452 185 aaPredicted RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 GP2P55259 537 aaKnown RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 DESI1Q6ICB0 168 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 CYP4Z1Q86W10 505 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 SCARF2Q96GP6 870 aaPredicted RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 TMEM184BQ9Y519 407 aaPredicted RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 IDH3BO43837 385 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 APOL3O95236 402 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 CT62P0C5K7 136 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 HSMCR30P0CW71 290 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 GSTM2P28161 218 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 EMX1Q04741 257 aaPredicted RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 DUSP5Q16690 384 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 BTBD16Q32M84 506 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF730Q6ZMV8 503 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 AGBL5Q8NDL9 886 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 AMBRA1Q9C0C7 1298 aa14.81□□□□□ -0.04
PDGFB-201ENST00000331163 GPN2Q9H9Y4 310 aaPredicted RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 THUMPD1Q9NXG2 353 aaKnown RBP14.81□□□□□ -0.04
PDGFB-201ENST00000331163 ROS1P08922 2347 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 SLC1A7O00341 560 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 PEX12O00623 359 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 HTR1AP08908 422 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 SAGP10523 405 aaPredicted RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 IGFBP5P24593 272 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 IL12BP29460 328 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NUDT6P53370 316 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NPTX1Q15818 432 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 GTF2IRD2BQ6EKJ0 949 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 OR2T5Q6IEZ7 315 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 HACD2Q6Y1H2 254 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 SLC16A12Q6ZSM3 486 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 IKBIPQ70UQ0 350 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 GTF2IRD2Q86UP8 949 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 CA13Q8N1Q1 262 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 FAM83FQ8NEG4 500 aaPredicted RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 OR56A1Q8NGH5 318 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 OR2T29Q8NH02 315 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 OR4C6Q8NH72 309 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 LMF1Q96S06 567 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 ENPP5Q9UJA9 477 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 RALGAPA1Q6GYQ0 2036 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 C9J4A7 227 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 UPK1AO00322 258 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 TFECO14948 347 aaPredicted RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 TIAF1O95411 115 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NTN1O95631 604 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 IGLV3-19P01714 112 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 ALPLP05186 524 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 PDX1P52945 283 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 LARS2Q15031 903 aaKnown RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 AHSA2Q719I0 299 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 LGI4Q8N135 537 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 STT3BQ8TCJ2 826 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 STON2Q8WXE9 905 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 CENPOQ9BU64 300 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF717Q9BY31 904 aaPredicted RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NOTOA8MTQ0 251 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 FAM20BO75063 409 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NOS3P29474 1203 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 EMP2P54851 167 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NKAIN1Q4KMZ8 207 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 GALNT6Q8NCL4 622 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 OR52P1PQ8NH57 321 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 SAP25Q8TEE9 199 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 S100ZQ8WXG8 99 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 COQ8BQ96D53 544 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 DUS3LQ96G46 650 aaKnown RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 SENP5Q96HI0 755 aaPredicted RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 BARD1Q99728 777 aaKnown RBP14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NTN4Q9HB63 628 aa14.8□□□□□ -0.04
PDGFB-201ENST00000331163 NEK6Q9HC98 313 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms