RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SMAD5Q99717 465 aaKnown RBP15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 CIB1Q99828 191 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 MFRPQ9BY79 579 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 GPR83Q9NYM4 423 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 A0A1W2PQ72 361 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 TGFBR3LH3BV60 316 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 GUSBP08236 651 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 C8orf89P0DMQ9 161 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 NR2F1P10589 423 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 MAOAP21397 527 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 ITGA3P26006 1051 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 PGDP52209 483 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 KCNC4Q03721 635 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 AIMP2Q13155 320 aaKnown RBP15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 RFX4Q33E94 735 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF628Q5EBL2 1059 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 OR2T5Q6IEZ7 315 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 FAM180BQ6P0A1 224 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 TNFAIP8L2Q6P589 184 aaPredicted RBP15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 NDUFAF7Q7L592 441 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 RBMXL3Q8N7X1 1067 aaKnown RBP15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 OR2T29Q8NH02 315 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 ADAMTS15Q8TE58 950 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 ANKRD9Q96BM1 317 aaPredicted RBP15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 RBM18Q96H35 190 aaKnown RBP15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 TMEM19Q96HH6 336 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 VPS50Q96JG6 964 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 IMMP1LQ96LU5 166 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF700Q9H0M5 742 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 EVA1AQ9H8M9 152 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 NECTIN3Q9NQS3 549 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 OAZ3Q9UMX2 235 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 CLDN16Q9Y5I7 305 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 CSAG2Q9Y5P2 127 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 NUP210LQ5VU65 1888 aa15.23■□□□□ 0.03
PDLIM1-201ENST00000329399 MYOCOSA0A1B0GUC4 107 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 UPK1AO00322 258 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 ADAMDEC1O15204 470 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 SLC28A2O43868 658 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 FGF17O60258 216 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 GCM2O75603 506 aaPredicted RBP15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 SEC24DO94855 1032 aaPredicted RBP15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 HPP00738 406 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 PLA2G2AP14555 144 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF23P17027 643 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 MC3RP41968 323 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 PRKAG1P54619 331 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 KCNJ10P78508 379 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 STX4Q12846 297 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 AP1ARQ63HQ0 302 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 PRICKLE2Q7Z3G6 844 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF605Q86T29 641 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 FAM86B1Q8N7N1 296 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 CDRT4Q8N9R6 151 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 PLPP5Q8NEB5 264 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 XAGE5Q8WWM1 108 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 CTHRC1Q96CG8 243 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 THOC3Q96J01 351 aaKnown RBP15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 STACQ99469 402 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 RBM4BQ9BQ04 359 aaKnown RBP15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 RBM4Q9BWF3 364 aaKnown RBP15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 PRTFDC1Q9NRG1 225 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 DUSP22Q9NRW4 184 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 LUZP4Q9P127 313 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 V9GYQ6 96 aa15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 UBR5O95071 2799 aaPredicted RBP15.22■□□□□ 0.03
PDLIM1-201ENST00000329399 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 G3V2T6 193 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 ACOX3O15254 700 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 C1QCP02747 245 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 BCHEP06276 602 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 OR12D1P0DN82 309 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 DNAJA1P31689 397 aaKnown RBP15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 MAN2A2P49641 1150 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 ST13P50502 369 aaKnown RBP15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 ALDH3A2P51648 485 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 LASP1Q14847 261 aaKnown RBP15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 NSDHLQ15738 373 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 PRICKLE4Q2TBC4 344 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 FHL5Q5TD97 284 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 MFSD12Q6NUT3 480 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 SZRD1Q7Z422 152 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 CPEB2Q7Z5Q1 589 aaKnown RBP15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 CBR4Q8N4T8 237 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 NR4A3Q92570 626 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 GIMAP5Q96F15 307 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 TPD52L3Q96J77 140 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 C7orf34Q96L11 122 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 NTN4Q9HB63 628 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 CACYBPQ9HB71 228 aaKnown RBP15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 POLE3Q9NRF9 147 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 USE1Q9NZ43 259 aa15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 GPC6Q9Y625 555 aaPredicted RBP15.21■□□□□ 0.03
PDLIM1-201ENST00000329399 NSG1A0A0A6YYJ2 146 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 OR10H2O60403 315 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 MFN2O95140 757 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 ITGAMP11215 1152 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 NT5EP21589 574 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 DUSP2Q05923 314 aa15.2■□□□□ 0.02
PDLIM1-201ENST00000329399 SLC13A2Q13183 592 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms