RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 BAG5Q9UL15 447 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 IFT52Q9Y366 437 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 H0Y3Z8 333 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 DBIP07108 87 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 THBS1P07996 1170 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 CELA2AP08217 269 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 PRKAR1BP31321 381 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 KRT20P35900 424 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 RFX3P48380 749 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 KCNJ5P48544 419 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 NRG3P56975 720 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 TAGAPQ8N103 731 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 SMYD1Q8NB12 490 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 GPR32P1Q8NGA4 272 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 OR10Q1Q8NGQ4 319 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 OR52P1PQ8NH57 321 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 OIT3Q8WWZ8 545 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 DIO2Q92813 273 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 OMA1Q96E52 524 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 PINK1Q9BXM7 581 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 QRSL1Q9H0R6 528 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF443Q9Y2A4 671 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 WDFY3Q8IZQ1 3526 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 CDC14CA4D256 554 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 NPIPB9F8W1W9 429 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 NADKO95544 446 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 SERPINA7P05543 415 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 ABCD3P28288 659 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 KCNJ10P78508 379 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 CHAF1BQ13112 559 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 LIN52Q52LA3 116 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF311Q5JNZ3 666 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 FKBP9P1Q75LS8 142 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 PRR22Q8IZ63 422 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 ARMC10Q8N2F6 343 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 THAP3Q8WTV1 239 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 GEMIN6Q8WXD5 167 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 EFHD2Q96C19 240 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 YY1AP1Q9H869 796 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 MYOTQ9UBF9 498 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 KCNE5Q9UJ90 142 aa9.45□□□□□ -0.9
VIPAS39-201ENST00000327028 NPIPA5A0A0B4J1W7 369 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 CENPVL1A0A0U1RR11 272 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 NPIPA7E9PJI5 369 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 SYT5O00445 386 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 HNRNPRO43390 633 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 TSPAN2O60636 221 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 UGT2B17O75795 530 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 NPIPA8P0DM63 369 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ITGAMP11215 1152 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 FCGR1AP12314 374 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ANPEPP15144 967 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 IL12BP29460 328 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 DCTP40126 519 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 MAGEA2P43356 314 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 Q0VFX4 171 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 LARS2Q15031 903 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF141Q15928 474 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 DUSP7Q16829 419 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 TCTN3Q6NUS6 607 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF836Q6ZNA1 936 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 HMGN2P46Q86SG4 172 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 VRK2Q86Y07 508 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 KBTBD2Q8IY47 623 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC22A8Q8TCC7 542 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 APOBEC4Q8WW27 367 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 PROX1Q92786 737 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ZG16BQ96DA0 208 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF354BQ96LW1 612 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 CHID1Q9BWS9 393 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 LIN28AQ9H9Z2 209 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 STX18Q9P2W9 335 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 AKAP13Q12802 2813 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 WWP2O00308 870 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 TPST1O60507 370 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 REM1O75628 298 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 PPM1BO75688 479 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 FESP07332 822 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 PNLIPRP2P54317 469 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ATP12AP54707 1039 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 EEF1A1P68104 462 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 MAPK14Q16539 360 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 EIPR1Q53HC9 387 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 RNF220Q5VTB9 566 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 SLC15A4Q8N697 577 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 C7orf34Q96L11 122 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 HOXD1Q9GZZ0 328 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 NKX1-2Q9UD57 310 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 ZNF232Q9UNY5 417 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 NPFFR2Q9Y5X5 522 aa9.44□□□□□ -0.9
VIPAS39-201ENST00000327028 CEP295Q9C0D2 2601 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 OR6C70A6NIJ9 312 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 HS6ST1O60243 411 aa9.43□□□□□ -0.9
VIPAS39-201ENST00000327028 ABCB7O75027 752 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms