RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TAGAPQ8N103 731 aa17.08■□□□□ 0.33
USP39-201ENST00000323701 ZNF619Q8N2I2 560 aa17.08■□□□□ 0.33
USP39-201ENST00000323701 SENP5Q96HI0 755 aaPredicted RBP17.08■□□□□ 0.33
USP39-201ENST00000323701 VN1R1Q9GZP7 353 aa17.08■□□□□ 0.33
USP39-201ENST00000323701 NDRG4Q9ULP0 352 aaKnown RBP17.08■□□□□ 0.33
USP39-201ENST00000323701 CDC14AQ9UNH5 594 aa17.08■□□□□ 0.33
USP39-201ENST00000323701 TRIM64A6NGJ6 449 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 D6RAR5 112 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 THY1P04216 161 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 QSOX2Q6ZRP7 698 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 PEX5LQ8IYB4 626 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 CNIH3Q8TBE1 160 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 GFM1Q96RP9 751 aaKnown RBP17.08■□□□□ 0.32
USP39-201ENST00000323701 PHOX2BQ99453 314 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 CTRCQ99895 268 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 ITPAQ9BY32 194 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 GABARAPL3Q9BY60 117 aa17.08■□□□□ 0.32
USP39-201ENST00000323701 CPSF4LA6NMK7 179 aaKnown RBP17.07■□□□□ 0.32
USP39-201ENST00000323701 NTN3O00634 580 aaPredicted RBP17.07■□□□□ 0.32
USP39-201ENST00000323701 CLPTM1O96005 669 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 RPP38P78345 283 aaKnown RBP17.07■□□□□ 0.32
USP39-201ENST00000323701 SERTAD2Q14140 314 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 PODNL1Q6PEZ8 512 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 BMP8AQ7Z5Y6 402 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 MEX3DQ86XN8 651 aaKnown RBP17.07■□□□□ 0.32
USP39-201ENST00000323701 MKL2Q9ULH7 1088 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 MMACHCQ9Y4U1 282 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 KIF26BQ2KJY2 2108 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 NUP210LQ5VU65 1888 aa17.07■□□□□ 0.32
USP39-201ENST00000323701 PRAMEF2O60811 474 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 IGFBP1P08833 259 aaPredicted RBP17.06■□□□□ 0.32
USP39-201ENST00000323701 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 ANXA8P13928 327 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 ZNF136P52737 540 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 ACY1Q03154 408 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 NSDHLQ15738 373 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 LCN10Q6JVE6 187 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 KLHL17Q6TDP4 642 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 LANCL3Q6ZV70 420 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 PRRC1Q96M27 445 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 PSD2Q9BQI7 771 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 FNDC11Q9BVV2 318 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 ING2Q9H160 280 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 AKIRIN1Q9H9L7 192 aaPredicted RBP17.06■□□□□ 0.32
USP39-201ENST00000323701 RXFP3Q9NSD7 469 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 SEMA4GQ9NTN9 838 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 A0A1W2PRQ8 180 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 TCRBV16S1A1N1A0A5B0 115 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 SH3PXD2BA1X283 911 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 SCRG1O75711 98 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 DDAH2O95865 285 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 SLC37A1P57057 533 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 DGCR6Q14129 220 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 KCTD21Q4G0X4 260 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 PLA2G2CQ5R387 149 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 DCST1Q5T197 706 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 MRPL2Q5T653 305 aaKnown RBP17.06■□□□□ 0.32
USP39-201ENST00000323701 FAAH2Q6GMR7 532 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 DIO2Q92813 273 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 GPA33Q99795 319 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 MRPS26Q9BYN8 205 aaKnown RBP17.06■□□□□ 0.32
USP39-201ENST00000323701 OR8D2Q9GZM6 311 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 FTSJ1Q9UET6 329 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 GMPPBQ9Y5P6 360 aa17.06■□□□□ 0.32
USP39-201ENST00000323701 KHNYNO15037 678 aaKnown RBP17.05■□□□□ 0.32
USP39-201ENST00000323701 UGT2B11O75310 529 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 TPD52P55327 224 aaPredicted RBP17.05■□□□□ 0.32
USP39-201ENST00000323701 RGS8P57771 180 aaPredicted RBP17.05■□□□□ 0.32
USP39-201ENST00000323701 YOD1Q5VVQ6 348 aaPredicted RBP17.05■□□□□ 0.32
USP39-201ENST00000323701 DBX2Q6ZNG2 339 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 MORN4Q8NDC4 146 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 FBLIM1Q8WUP2 373 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 PMEPA1Q969W9 287 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 RARRES3Q9UL19 164 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 IFT52Q9Y366 437 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 PCDHGA6Q9Y5G7 932 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 OR10H3O60404 316 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 ADAM11O75078 769 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 NID1P14543 1247 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 PTNP21246 168 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 GALNSP34059 522 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 RPS6KA3P51812 740 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 KEAP1Q14145 624 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 LARS2Q15031 903 aaKnown RBP17.05■□□□□ 0.32
USP39-201ENST00000323701 FLYWCH1Q4VC44 716 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 ENTPD8Q5MY95 495 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 C6orf141Q5SZD1 244 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 PDZK1Q5T2W1 519 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 PGBD2Q6P3X8 592 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 STT3BQ8TCJ2 826 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 ADAMTS16Q8TE57 1224 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 ZNF721Q8TF20 911 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 SLC7A5P2Q9GIP4 190 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 C11orf16Q9NQ32 467 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 SLC13A4Q9UKG4 626 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 SRPK3Q9UPE1 567 aa17.05■□□□□ 0.32
USP39-201ENST00000323701 CDHR4A6H8M9 788 aa17.04■□□□□ 0.32
USP39-201ENST00000323701 M0R129 80 aa17.04■□□□□ 0.32
USP39-201ENST00000323701 IGKV3-11P04433 115 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms