RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ID2Q02363 134 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 SEC23BQ15437 767 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 GARNL3Q5VVW2 1013 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 BAIAP2L2Q6UXY1 529 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 ERN2Q76MJ5 926 aaKnown RBP11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 ZER1Q7Z7L7 766 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 OR14C36Q8NHC7 312 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 TM4SF18Q96CE8 201 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 OTUB2Q96DC9 234 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 WDFY2Q96P53 400 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF780AO75290 641 aaPredicted RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 IGHA2P01877 340 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 PSMB5P28074 263 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 GAREM2Q75VX8 874 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 GET4Q7L5D6 327 aaPredicted RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 VRK2Q86Y07 508 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 OR4K14Q8NGD5 310 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 CLIP3Q96DZ5 547 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 DHRS1Q96LJ7 313 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 COQ10AQ96MF6 247 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 MVB12BQ9H7P6 319 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 OR51B4Q9Y5P0 310 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 PSME4Q14997 1843 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 STK25O00506 426 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 PLPP1O14494 284 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 SSTR2P30874 369 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 CRYBB2P43320 205 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 RAE1P78406 368 aaKnown RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 KIAA1211LQ6NV74 962 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 VITQ6UXI7 678 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 TMC8Q8IU68 726 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 CYB561A3Q8NBI2 242 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 C15orf40Q8WUR7 153 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 TSEN15Q8WW01 171 aaKnown RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 FCAMRQ8WWV6 532 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 OR2M2Q96R28 347 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 MS4A8Q9BY19 250 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 C14orf105Q9NVL8 296 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 LYARQ9NX58 379 aaKnown RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 QPCTLQ9NXS2 382 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC7A7Q9UM01 511 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 MYO7AQ13402 2215 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 TRBV2A0A0J9YWF9 115 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 PAHP00439 452 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 HBQ1P09105 142 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 MAT2AP31153 395 aaKnown RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 HENMT1Q5T8I9 393 aaKnown RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 HBMQ6B0K9 141 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF782Q6ZMW2 699 aaPredicted RBP11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 CCDC36Q8IYA8 594 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 CEP76Q8TAP6 659 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 PRR14Q9BWN1 585 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 ACTRT3Q9BYD9 372 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 TMPRSS11EQ9UL52 423 aa11.98□□□□□ -0.49
DNMT3A-202ENST00000321117 TRAPPC13A5PLN9 417 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 GTPBP1O00178 669 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC31A1O15431 190 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 LRRTM2O43300 516 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 BMPR1AP36894 532 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 HMGA2P52926 109 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 FABP5Q01469 135 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 TPBGQ13641 420 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ELAVL3Q14576 367 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 C4orf46Q504U0 113 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 LAS2Q8IYD9 372 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF676Q8N7Q3 588 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR2L2Q8NH16 312 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 GOT1L1Q8NHS2 421 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 COQ8AQ8NI60 647 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 MACROD1Q9BQ69 325 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 LGR4Q9BXB1 951 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR10A4Q9H209 315 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 MTHFD2LQ9H903 347 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 IGLV3-16A0A075B6K0 115 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 FAM25EA8MYX2 175 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 MEN1O00255 615 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 AKR7A2O43488 359 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ECDO95905 644 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 RAB28P51157 221 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 CHRNEQ04844 493 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ACSM3Q53FZ2 586 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ENTPD8Q5MY95 495 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF362Q5T0B9 420 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 TIGD3Q6B0B8 471 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 MTFR2Q6P444 385 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 QSOX2Q6ZRP7 698 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC39A11Q8N1S5 342 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 HDDC3Q8N4P3 179 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR4E2Q8NGC2 313 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 BCL7CQ8WUZ0 217 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 TMEM43Q9BTV4 400 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 COMMD4Q9H0A8 199 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR52D1Q9H346 318 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 MGAMO43451 1857 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 A0A0G2JMP0 313 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 A0A0X1KG70 313 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 SERTM1A2A2V5 107 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms