RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 MFSD9Q8NBP5 474 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 FGF11Q92914 225 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SLC41A3Q96GZ6 507 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF486Q96H40 463 aaPredicted RBP16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SECISBP2Q96T21 854 aaKnown RBP16.28■□□□□ 0.2
COL9A1-201ENST00000320755 H2AFY2Q9P0M6 372 aaPredicted RBP16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SNX7Q9UNH6 387 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 SLC17A4Q9Y2C5 497 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 GSTK1Q9Y2Q3 226 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 WDR45Q9Y484 360 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 C2orf16Q68DN1 1984 aa16.28■□□□□ 0.2
COL9A1-201ENST00000320755 IQCMA0A1B0GVH7 501 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 CD8B2A6NJW9 211 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 CDC42EP2O14613 210 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 CD8BP10966 210 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 SLC1A3P43003 542 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ABATP80404 500 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 PUS10Q3MIT2 529 aaKnown RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 MINDY4Q4G0A6 757 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ABI3BPQ7Z7G0 1075 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 CPOQ8IVL8 374 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 TRIM48Q8IWZ4 208 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ATP6V1C2Q8NEY4 427 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 SRMSQ9H3Y6 488 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ARHGEF17Q96PE2 2063 aaPredicted RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 MN1Q10571 1320 aaPredicted RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 GPR89AB7ZAQ6 455 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 GPR89BP0CG08 455 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 PRG2P13727 222 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 APEX1P27695 318 aaKnown RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 PPP2CBP62714 309 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 PPP2CAP67775 309 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 TRMT12Q53H54 448 aaKnown RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF362Q5T0B9 420 aaPredicted RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ATAD3CQ5T2N8 411 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF776Q68DI1 518 aaPredicted RBP16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ZNF544Q6NX49 715 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 RASSF6Q6ZTQ3 369 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 DTX3Q8N9I9 347 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 OR51G2Q8NGK0 314 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 SLC35B4Q969S0 331 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 ARHGDIGQ99819 225 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 CTRCQ99895 268 aa16.27■□□□□ 0.2
COL9A1-201ENST00000320755 MUC22E2RYF6 1773 aaPredicted RBP16.27■□□□□ 0.19
COL9A1-201ENST00000320755 VCANP13611 3396 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 DVL2O14641 736 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 CSF3P09919 207 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 SLC16A1P53985 500 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 BNC1Q01954 994 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 AGERQ15109 404 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 SLC25A30Q5SVS4 291 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 MARCH9Q86YJ5 346 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 IL17RCQ8NAC3 791 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 UBASH3BQ8TF42 649 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 GIMAP5Q96F15 307 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 SMAD5Q99717 465 aaKnown RBP16.27■□□□□ 0.19
COL9A1-201ENST00000320755 C11orf54Q9H0W9 315 aaPredicted RBP16.27■□□□□ 0.19
COL9A1-201ENST00000320755 GDE1Q9NZC3 331 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 LIPT1Q9Y234 373 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 COLEC10Q9Y6Z7 277 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 SPTBP11277 2137 aa16.27■□□□□ 0.19
COL9A1-201ENST00000320755 GSAPA4D1B5 854 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 C5orf67F2Z3F1 127 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 GPR50Q13585 617 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 DUSP5Q16690 384 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 RNLSQ5VYX0 342 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 PARM1Q6UWI2 310 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 FRRS1Q6ZNA5 592 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 KLBQ86Z14 1044 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 OR6F1Q8NGZ6 308 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 ACOT11Q8WXI4 607 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 FGF14Q92915 247 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 MOAP1Q96BY2 351 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 DPH1Q9BZG8 443 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 SFXN1Q9H9B4 322 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 CACYBPQ9HB71 228 aaKnown RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 FGF20Q9NP95 211 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 CD93Q9NPY3 652 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 ZNF232Q9UNY5 417 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 SF3B6Q9Y3B4 125 aaKnown RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 PCDHGB2Q9Y5G2 931 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 N6AMT1Q9Y5N5 214 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 TMEM129A0AVI4 362 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 PRSS38A1L453 326 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 MEIOCA2RUB1 952 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 HPGDSO60760 199 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 LDB3O75112 727 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 ACTR1BP42025 376 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 ACTR1AP61163 376 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 MRPS15P82914 257 aaKnown RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 IFITM2Q01629 132 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 TPBGQ13641 420 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 LRRC25Q8N386 305 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 SPRYD4Q8WW59 207 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-201ENST00000320755 OSTF1Q92882 214 aa16.26■□□□□ 0.19
COL9A1-201ENST00000320755 EFHD2Q96C19 240 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms