RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MAD2L1BPQ15013 274 aaPredicted RBP16.55■□□□□ 0.24
RAB39A-201ENST00000320578 ANGPT1Q15389 498 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 PGBD2Q6P3X8 592 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 PODNL1Q6PEZ8 512 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 GRAMD2AQ8IUY3 354 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 DEPDC4Q8N2C3 294 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 MORN4Q8NDC4 146 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 C16orf52Q8NHV5 167 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 ART5Q96L15 291 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CCDC74BQ96LY2 380 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 SLC46A1Q96NT5 459 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CNPPD1Q9BV87 410 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 YIPF2Q9BWQ6 316 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 UCK2Q9BZX2 261 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 RARRES3Q9UL19 164 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 UNC13CQ8NB66 2214 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CDHR4A6H8M9 788 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 HRKO00198 91 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 OR10H3O60404 316 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 OSMP13725 252 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 IFNGR2P38484 337 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 UGT2B15P54855 530 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 ZNF141Q15928 474 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 MAPK14Q16539 360 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAB39A-201ENST00000320578 NADK2Q4G0N4 442 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 PRAMEF17Q5VTA0 474 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 FOXB2Q5VYV0 432 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 C1orf94Q6P1W5 598 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 KLHL17Q6TDP4 642 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 SLITRK4Q8IW52 837 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 TMEM151BQ8IW70 566 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 SENP5Q96HI0 755 aaPredicted RBP16.54■□□□□ 0.24
RAB39A-201ENST00000320578 KCNE5Q9UJ90 142 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 RP1P56715 2156 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 SPTBP11277 2137 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 ZDBF2Q9HCK1 2354 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 COL6A3P12111 3177 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 ADAMTS20P59510 1910 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 NPIPB9F8W1W9 429 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 GP1BAP07359 652 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CT45A8P0DMV1 189 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CT45A9P0DMV2 189 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 ZNF136P52737 540 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CRISP1P54107 249 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CDH15P55291 814 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CT45A2Q5DJT8 189 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 BROXQ5VW32 411 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 FIGNL1Q6PIW4 674 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 NPSR1Q6W5P4 371 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 HMGN2P46Q86SG4 172 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 SATL1Q86VE3 508 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 RANBP3LQ86VV4 465 aaPredicted RBP16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CCDC71Q8IV32 467 aaPredicted RBP16.54■□□□□ 0.24
RAB39A-201ENST00000320578 CMIPQ8IY22 773 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 OR2I1PQ8NGU4 316 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 OR14A16Q8NHC5 309 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 GFM1Q96RP9 751 aaKnown RBP16.54■□□□□ 0.24
RAB39A-201ENST00000320578 MCHR1Q99705 422 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 ADNPQ9H2P0 1102 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 FBXO34Q9NWN3 711 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 REV1Q9UBZ9 1251 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 FTSJ1Q9UET6 329 aa16.54■□□□□ 0.24
RAB39A-201ENST00000320578 DNAH14Q0VDD8 3507 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 OR2W5A6NFC9 320 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 ZAR1LA6NP61 321 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 SLC1A7O00341 560 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 ANGPTL1O95841 491 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 IGKV3-11P04433 115 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 GSTM3P21266 225 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 DRD5P21918 477 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 TTKP33981 857 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 MPLP40238 635 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 PPICP45877 212 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 PGDP52209 483 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 SLC37A1P57057 533 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 DCAF7P61962 342 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 DECR1Q16698 335 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 FLYWCH1Q4VC44 716 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 ENTPD8Q5MY95 495 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 RCBTB1Q8NDN9 531 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 OR4K5Q8NGD3 323 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 DAZLQ92904 295 aaKnown RBP16.53■□□□□ 0.24
RAB39A-201ENST00000320578 GTPBP3Q969Y2 492 aaKnown RBP16.53■□□□□ 0.24
RAB39A-201ENST00000320578 DGCR14Q96DF8 476 aaKnown RBP16.53■□□□□ 0.24
RAB39A-201ENST00000320578 OR6C1Q96RD1 312 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.53■□□□□ 0.24
RAB39A-201ENST00000320578 C14orf105Q9NVL8 296 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 CBLCQ9ULV8 474 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 TPRKBQ9Y3C4 175 aa16.53■□□□□ 0.24
RAB39A-201ENST00000320578 KHNYNO15037 678 aaKnown RBP16.52■□□□□ 0.24
RAB39A-201ENST00000320578 MPZL2O60487 215 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 ABCB7O75027 752 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 CYC1P08574 325 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 JUNBP17275 347 aaPredicted RBP16.52■□□□□ 0.24
RAB39A-201ENST00000320578 LCN1P31025 176 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 GRK6P43250 576 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 MINDY4Q4G0A6 757 aa16.52■□□□□ 0.24
RAB39A-201ENST00000320578 MRPL2Q5T653 305 aaKnown RBP16.52■□□□□ 0.24
RAB39A-201ENST00000320578 COX15Q7KZN9 410 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms