RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MCRIP1C9JLW8 97 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 TSTD3H0UI37 97 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 H3BNC9 293 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 OR10H2O60403 315 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MPZL2O60487 215 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 GATBO75879 557 aaKnown RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 C6orf47O95873 294 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 THP07101 528 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ALPIP09923 528 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HGFP14210 728 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 GPX2P18283 190 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 GALP22466 123 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CSF2RBP32927 897 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CEACAM6P40199 344 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CRYBB2P43320 205 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MAPK8P45983 427 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 LIMS1P48059 325 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 GATMP50440 423 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HMGA2P52926 109 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PLK1P53350 603 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MTPNP58546 118 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 NPRL3Q12980 569 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CTBP1Q13363 440 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 TUSC3Q13454 348 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ST3GAL2Q16842 350 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM35AQ53FP2 167 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SPRYD7Q5W111 196 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CDPF1Q6NVV7 123 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ARMC6Q6NXE6 501 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CASP12Q6UXS9 341 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SSX6Q7RTT6 188 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 TP53INP2Q8IXH6 220 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 MSRB3Q8IXL7 192 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 CPEB3Q8NE35 698 aaKnown RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 OR5T3Q8NGG3 340 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 OR10K1Q8NGX5 313 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 OR4Q3Q8NH05 313 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 ST7LQ8TDW4 575 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 FAM162AQ96A26 154 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 PLD4Q96BZ4 506 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 R3HDM4Q96D70 268 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SPATA5L1Q9BVQ7 753 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 HDHD2Q9H0R4 259 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 SERHLQ9NQF3 203 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 EXOSC3Q9NQT5 275 aaKnown RBP6.26□□□□□ -1.41
ZNF540-201ENST00000316433 DZANK1Q9NVP4 752 aa6.26□□□□□ -1.41
ZNF540-201ENST00000316433 F5H423 210 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CBR3O75828 277 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 EOMESO95936 686 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 VIPP01282 170 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SCG5P05408 212 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 OR4E1P0C645 316 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 NQO2P16083 231 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 HIST1H1BP16401 226 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 C5AR1P21730 350 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CDKN2CP42773 168 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 OMPP47874 163 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 RGS4P49798 205 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 NDUFV1P49821 464 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 RAB5CP51148 216 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 GTF2A2P52657 109 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 PURAQ00577 322 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SEMG2Q02383 582 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CLINT1Q14677 625 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 ZNHIT3Q15649 155 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 MS4A13Q5J8X5 152 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 TMPRSS11FQ6ZWK6 438 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SAMD7Q7Z3H4 446 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 LRRC56Q8IYG6 542 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 PRSS35Q8N3Z0 413 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SLC44A3Q8N4M1 653 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 FBXO15Q8NCQ5 510 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 DENND6BQ8NEG7 585 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 OR6J1Q8NGC5 347 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 OR8J2Q8NGG1 315 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SLC25A36Q96CQ1 311 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 FAM122AQ96E09 287 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 PYURFQ96I23 114 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 MS4A4AQ96JQ5 239 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 POLDIP3Q9BY77 421 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 ARHGAP39Q9C0H5 1083 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SIK2Q9H0K1 926 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 DPAGT1Q9H3H5 408 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 VAPAQ9P0L0 249 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CFAP97Q9P2B7 532 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SLC9A8Q9Y2E8 581 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 CHST2Q9Y4C5 530 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 H7C1Q1 480 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 OR7A17O14581 309 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 RGS14O43566 566 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 SUSD5O60279 629 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 ASGR1P07306 291 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 USP17L7P0C7H9 530 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 LINC00614P0C842 121 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 PKMP14618 531 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 AGAP20933 346 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 HOXD9P28356 352 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 DNAJA1P31689 397 aaKnown RBP6.25□□□□□ -1.41
ZNF540-201ENST00000316433 BTCP35070 178 aa6.25□□□□□ -1.41
ZNF540-201ENST00000316433 MAP3K8P41279 467 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms