RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 KIR2DS5Q14953 304 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 UBE2UQ5VVX9 321 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 NKAIN2Q5VXU1 208 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 CCBE1Q6UXH8 406 aaPredicted RBP11.59□□□□□ -0.55
RNF4-201ENST00000314289 NKAIN4Q8IVV8 208 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 ITPAQ9BY32 194 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 PLA2G12AQ9BZM1 189 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 BCL2L10Q9HD36 194 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 DDX28Q9NUL7 540 aaKnown RBP11.59□□□□□ -0.55
RNF4-201ENST00000314289 GPR52Q9Y2T5 361 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 WDR45Q9Y484 360 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 A0A087WUU8 490 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 HRKO00198 91 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 FAAHO00519 579 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 PEX12O00623 359 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 ADAP00813 363 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 KRT8P05787 483 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 IL9P15248 144 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 S100A5P33763 92 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 CEBPEQ15744 281 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 NNATQ16517 81 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 MAPK14Q16539 360 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 FRRS1Q6ZNA5 592 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 GATAD2AQ86YP4 633 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 DEPDC4Q8N2C3 294 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 ZNF614Q8N883 585 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 MS4A4EQ96PG1 132 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 OR5M11Q96RB7 305 aa11.59□□□□□ -0.55
RNF4-201ENST00000314289 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 ISPDA4D126 451 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 METTL15A6NJ78 407 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 A8MV72 311 aaPredicted RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 M0R082 166 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 TLX2O43763 284 aaPredicted RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 IDH3BO43837 385 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 GALR3O60755 368 aaPredicted RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 CH25HO95992 272 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 CDK1P06493 297 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 CKMT1AP12532 417 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 PRG2P13727 222 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 ANXA11P50995 505 aaKnown RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 GFERP55789 205 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 RGS8P57771 180 aaPredicted RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 MED22Q15528 200 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 NDUFA5Q16718 116 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 TIGD6Q17RP2 521 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 ZNF181Q2M3W8 571 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 PARP16Q8N5Y8 322 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 GPR151Q8TDV0 419 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 SLC38A4Q969I6 547 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 FAM46AQ96IP4 442 aaKnown RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 SPATA5L1Q9BVQ7 753 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 MMP27Q9H306 513 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 CCNB1IP1Q9NPC3 277 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 ACAD8Q9UKU7 415 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 TMA7Q9Y2S6 64 aaKnown RBP11.58□□□□□ -0.55
RNF4-201ENST00000314289 RP1P56715 2156 aa11.58□□□□□ -0.55
RNF4-201ENST00000314289 THADAQ6YHU6 1953 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 CYR61O00622 381 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 BMP8BP34820 402 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 GRK5P34947 590 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 CSNK1EP49674 416 aaKnown RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 RPL6Q02878 288 aaKnown RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 ACSM5Q6NUN0 579 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 CA13Q8N1Q1 262 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 ARL14Q8N4G2 192 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 IPCEF1Q8WWN9 437 aaPredicted RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 PEX11GQ96HA9 241 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 SIGLEC11Q96RL6 698 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 A0A1W2PRQ8 180 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 GXYLT2A0PJZ3 443 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 ANKRD34BA5PLL1 514 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 SAGE2PA6NJ88 616 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 PRKYO43930 277 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 PIP5K1CO60331 668 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 UBXN7O94888 489 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 TP53P04637 393 aaPredicted RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 CCNYL3P0C7X3 344 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 GPR4P46093 362 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 FZD5Q13467 585 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 PUS10Q3MIT2 529 aaKnown RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 ENTPD8Q5MY95 495 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 TYW3Q6IPR3 259 aaKnown RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 CDC73Q6P1J9 531 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 CASP12Q6UXS9 341 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 OR2L13Q8N349 312 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 MORN4Q8NDC4 146 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 ZNF675Q8TD23 568 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 MYDGFQ969H8 173 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 PRRC1Q96M27 445 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 HSPA12BQ96MM6 686 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 Q96MT0 163 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 TGM7Q96PF1 710 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 TRNT1Q96Q11 434 aaKnown RBP11.58□□□□□ -0.56
RNF4-201ENST00000314289 C14orf119Q9NWQ9 140 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 UCKL1Q9NWZ5 548 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 CLEC2DQ9UHP7 191 aa11.58□□□□□ -0.56
RNF4-201ENST00000314289 FBXL21Q9UKT6 434 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms