RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MVB12AQ96EY5 273 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 RHNO1Q9BSD3 238 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 ANKRD19PQ9H560 264 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 LIN28AQ9H9Z2 209 aaKnown RBP19.76■□□□□ 0.75
ATG4D-201ENST00000309469 NECTIN3Q9NQS3 549 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 NDOR1Q9UHB4 597 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 PCDHGA10Q9Y5H3 936 aa19.76■□□□□ 0.75
ATG4D-201ENST00000309469 A0A087WUU8 490 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 PEX12O00623 359 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 RGS10O43665 173 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 KCNK2O95069 426 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 NID1P14543 1247 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 CNR2P34972 360 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 OR1D4P47884 311 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 SERTAD2Q14140 314 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 PLEKHM3Q6ZWE6 761 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 MAML2Q8IZL2 1156 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-201ENST00000309469 SAP25Q8TEE9 199 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 PIGKQ92643 395 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 MUL1Q969V5 352 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 VSTM2LQ96N03 204 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF578Q96N58 590 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-201ENST00000309469 NUDT22Q9BRQ3 303 aa19.75■□□□□ 0.75
ATG4D-201ENST00000309469 NPIPA5A0A0B4J1W7 369 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 NPIPA7E9PJI5 369 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 HYAL3O43820 417 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 SOX14O95416 240 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 IGFBP1P08833 259 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 NPIPA8P0DM63 369 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 GCGRP47871 477 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 BIKQ13323 160 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 HLA-BQ31612 363 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 ZC3H14Q6PJT7 736 aaKnown RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 GPR135Q8IZ08 494 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 EDAQ92838 391 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 DOK1Q99704 481 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 PELOQ9BRX2 385 aaKnown RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 CNPPD1Q9BV87 410 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 YIPF2Q9BWQ6 316 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 FSCN3Q9NQT6 498 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 LANCL2Q9NS86 450 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 SLC6A14Q9UN76 642 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 NTNG1Q9Y2I2 539 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 PCDH15Q96QU1 1955 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 H3BN98 237 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 PRAMEF2O60811 474 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 OR5F1O95221 314 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 TP53P04637 393 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 IFNA16P05015 189 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 MSL3P1P0C860 447 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 PNLIPP16233 465 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 GALNSP34059 522 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 ALDH6A1Q02252 535 aaKnown RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 FUT7Q11130 342 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 DYNC1I2Q13409 638 aaKnown RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 MED25Q71SY5 747 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 OR4C6Q8NH72 309 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 DHCR7Q9UBM7 475 aaKnown RBP19.74■□□□□ 0.75
ATG4D-201ENST00000309469 PSORS1C1Q9UIG5 152 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 SERTAD3Q9UJW9 196 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 GMEB2Q9UKD1 530 aa19.74■□□□□ 0.75
ATG4D-201ENST00000309469 MPZL2O60487 215 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 NOL3O60936 208 aaKnown RBP19.73■□□□□ 0.75
ATG4D-201ENST00000309469 MT-ND2P03891 347 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 GUSBP08236 651 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 IFNGR2P38484 337 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 PGDP52209 483 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF136P52737 540 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 NR0B2Q15466 257 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 MRPL2Q5T653 305 aaKnown RBP19.73■□□□□ 0.75
ATG4D-201ENST00000309469 PRAMEF17Q5VTA0 474 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 SLX4IPQ5VYV7 408 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 PTCHD4Q6ZW05 846 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 AHSA2Q719I0 299 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 PRSS48Q7RTY5 328 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 ZAR1Q86SH2 424 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 FAR1Q8WVX9 515 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 SLC41A3Q96GZ6 507 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 PTCHD1Q96NR3 888 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 GPA33Q99795 319 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 NDC1Q9BTX1 674 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF768Q9H5H4 540 aaKnown RBP19.73■□□□□ 0.75
ATG4D-201ENST00000309469 ERVK-19Q9WJR5 959 aa19.73■□□□□ 0.75
ATG4D-201ENST00000309469 CACNA1IQ9P0X4 2223 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 CDHR4A6H8M9 788 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 H3BMQ9 156 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 M0R129 80 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 THY1P04216 161 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 TNNI3P19429 210 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 FLYWCH1Q4VC44 716 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 TMEM71Q6P5X7 295 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF730Q6ZMV8 503 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 PRICKLE2Q7Z3G6 844 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 GDF7Q7Z4P5 450 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 RANBP3LQ86VV4 465 aaPredicted RBP19.72■□□□□ 0.75
ATG4D-201ENST00000309469 C1orf210Q8IVY1 113 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 OR4N2Q8NGD1 307 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 GNPDA2Q8TDQ7 276 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms