RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SORT1Q99523 831 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 C1orf50Q9BV19 199 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 MCCC2Q9HCC0 563 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 Q9N2J8 555 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 EQTNQ9NQ60 294 aa17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 FAM120CQ9NX05 1096 aaKnown RBP17.97■□□□□ 0.47
PDZRN3-202ENST00000308537 IGLV3-32A0A0A0MS00 114 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 TTC36A6NLP5 189 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 CTIFO43310 598 aaKnown RBP17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 SCO2O43819 266 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 ZNF708P17019 499 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 GABRA3P34903 492 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 DECR1Q16698 335 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 MFSD12Q6NUT3 480 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 IFNEQ86WN2 208 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 NUDCD3Q8IVD9 361 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 KRTCAP2Q8N6L1 136 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 ZNF781Q8N8C0 355 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 NUP43Q8NFH3 380 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 OR14L1PQ8NHC6 308 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 C16orf58Q96GQ5 468 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 DSN1Q9H410 356 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 CALHM2Q9HA72 323 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 FBXO34Q9NWN3 711 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 CLCF1Q9UBD9 225 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 ZNF629Q9UEG4 869 aaPredicted RBP17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 HAO1Q9UJM8 370 aa17.96■□□□□ 0.47
PDZRN3-202ENST00000308537 HIVEP1P15822 2718 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 RGS16O15492 202 aaPredicted RBP17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 CHMP24386 653 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 DPP4P27487 766 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 MANFP55145 182 aaKnown RBP17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 C21orf58P58505 322 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 DUSP5Q16690 384 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 GRAMD1BQ3KR37 738 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 ATP6AP1LQ52LC2 224 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 IL23RQ5VWK5 629 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 LRIG3Q6UXM1 1119 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 MARCH3Q86UD3 253 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 CDRT4Q8N9R6 151 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 ZFP28Q8NHY6 868 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 ZBTB9Q96C00 473 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 COQ8BQ96D53 544 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 MS4A4EQ96PG1 132 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 TRIB1Q96RU8 372 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 JKAMPQ9P055 326 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 MED11Q9P086 117 aa17.95■□□□□ 0.46
PDZRN3-202ENST00000308537 WDR91A4D1P6 747 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 TMEM114B3SHH9 223 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 SYT5O00445 386 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 BIRC5O15392 142 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 EMC8O43402 210 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 HCRTR2O43614 444 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 UTS2O95399 124 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 SERPINE1P05121 402 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 BMP5P22003 454 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 DSCR4P56555 118 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 PRR5P85299 388 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 FOXF2Q12947 444 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 ZNHIT3Q15649 155 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 CHI3L2Q15782 390 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 TMEM44Q2T9K0 475 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 R3HCC1LQ7Z5L2 792 aaKnown RBP17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 CEP70Q8NHQ1 597 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 FBXO30Q8TB52 745 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 RMND5BQ96G75 393 aaPredicted RBP17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 ASIC5Q9NY37 505 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 PPP4R1LQ9P1A2 415 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 KCNN3Q9UGI6 736 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 ACTL7BQ9Y614 415 aa17.94■□□□□ 0.46
PDZRN3-202ENST00000308537 CLCA1A8K7I4 914 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 TM9SF1O15321 606 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 KCNK2O95069 426 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 NGFRP08138 427 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 MAPK1P28482 360 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 GPC1P35052 558 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 DIO3P55073 304 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 SNTB1Q13884 538 aaKnown RBP17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 CEP85LQ5SZL2 805 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 ENPP6Q6UWR7 440 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 GALNT10Q86SR1 603 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 OR4C3Q8NH37 302 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 GPR151Q8TDV0 419 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 DUSP19Q8WTR2 217 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 OTUB1Q96FW1 271 aaPredicted RBP17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 PGM2Q96G03 612 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 SFXN2Q96NB2 322 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 KLHDC3Q9BQ90 382 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 CXorf36Q9H7Y0 433 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 GPATCH2Q9NW75 528 aa17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 RPH3AQ9Y2J0 694 aaPredicted RBP17.93■□□□□ 0.46
PDZRN3-202ENST00000308537 FAM221AA4D161 298 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 ENO4A6NNW6 628 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 ALG1L2C9J202 215 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 DVL2O14641 736 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 IL18BPO95998 194 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 IL2RAP01589 272 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 HMGN2P05204 90 aaKnown RBP17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 G6PDP11413 515 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms