RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ZNF763Q0D2J5 394 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GANABQ14697 944 aaKnown RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 UBXN2BQ14CS0 331 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GRK1Q15835 563 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF542PQ5EBM4 170 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC25A30Q5SVS4 291 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 DDI2Q5TDH0 399 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 LCN1P1Q5VSP4 162 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPR156Q8NFN8 814 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 HUS1BQ8NHY5 278 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 APOBEC4Q8WW27 367 aaKnown RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 DIRAS2Q96HU8 199 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 BMFQ96LC9 184 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 TSSK6Q9BXA6 273 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 FOXQ1Q9C009 403 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 LMAN1LQ9HAT1 526 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 C11orf16Q9NQ32 467 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLCO1B1Q9Y6L6 691 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 RFPL3O75679 317 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 EML2O95834 649 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 TGM6O95932 706 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 FURINP09958 794 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC35G4P0C7Q5 338 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SRFP11831 508 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 IFI30P13284 250 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 FOSL2P15408 326 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 KELP23276 732 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 PTBP1P26599 531 aaKnown RBP eCLIP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPC1P35052 558 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 DAB2P98082 770 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 CD83Q01151 205 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 DBPQ10586 325 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 HNRNPA0Q13151 305 aaKnown RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MAB21L1Q13394 359 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF267Q14586 743 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 AGERQ15109 404 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPR19Q15760 415 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MLF2Q15773 248 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 COL28A1Q2UY09 1125 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF628Q5EBL2 1059 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 CASP12Q6UXS9 341 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 UNC5DQ6UXZ4 953 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR4K1Q8NGD4 311 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 AP3S1Q92572 193 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MTERF3Q96E29 417 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC6A18Q96N87 628 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ISYNA1Q9NPH2 558 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 DNAJC27Q9NZQ0 273 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MBD2Q9UBB5 411 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 TRBV4-1A0A0J9YWV2 114 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAAHO00519 579 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FFAR1O14842 300 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 MYL12BO14950 172 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 TSPAN19P0C672 248 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 RRASP10301 218 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 ALAS2P22557 587 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRKAR1BP31321 381 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 CHI3L1P36222 383 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 GSTM5P46439 218 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 ALDH6A1Q02252 535 aaKnown RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF273Q14593 569 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 CYP27C1Q4G0S4 372 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PYDC2Q56P42 97 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 LAMTOR1Q6IAA8 161 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 TMEM81Q6P7N7 255 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 METAP1DQ6UB28 335 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 TEX261Q6UWH6 196 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLCO4C1Q6ZQN7 724 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR5T2Q8NGG2 359 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR1E3Q8WZA6 343 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 AKAP1Q92667 903 aaKnown RBP eCLIP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAM131CQ96AQ9 280 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 RAD51AP1Q96B01 352 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 WACQ9BTA9 647 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 RAB23Q9ULC3 237 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC17A4Q9Y2C5 497 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 U3KQ87 197 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 A0A0B4J203 849 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 WWP2O00308 870 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 FOXE1O00358 373 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 BTN3A3O00478 584 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 SNAPINO95295 136 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 ECDO95905 644 aaPredicted RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 TGFB1P01137 390 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 MAP2K3P46734 347 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 TGM4P49221 684 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 XKP51811 444 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 CASP9P55211 416 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 RPS13P62277 151 aaKnown RBP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PPP3R1P63098 170 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLBPQ14493 270 aaKnown RBP eCLIP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 KRT33BQ14525 404 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PUM1Q14671 1186 aaKnown RBP eCLIP9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 HEPACAMQ14CZ8 416 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC5A12Q1EHB4 618 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 PLK5Q496M5 336 aa9.68□□□□□ -0.86
APOBEC3F-201ENST00000308521 LIPKQ5VXJ0 399 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms