RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 BRINP1O60477 761 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CSO75390 466 aaKnown RBP6.45□□□□□ -1.38
PTCD2-201ENST00000308077 DNAJB5O75953 348 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 LGI1O95970 557 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 MT-CO3P00414 261 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 ALPPP05187 535 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 NPIPA8P0DM63 369 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CT45A8P0DMV1 189 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CT45A9P0DMV2 189 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 RPS4Y1P22090 263 aaKnown RBP6.45□□□□□ -1.38
PTCD2-201ENST00000308077 HPCAP84074 193 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 GK3PQ14409 553 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 TRIP6Q15654 476 aaKnown RBP6.45□□□□□ -1.38
PTCD2-201ENST00000308077 GPR68Q15743 365 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 NNATQ16517 81 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 MAPK14Q16539 360 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CT45A2Q5DJT8 189 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CMPK2Q5EBM0 449 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF311Q5JNZ3 666 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 OTUD3Q5T2D3 398 aaPredicted RBP6.45□□□□□ -1.38
PTCD2-201ENST00000308077 RAB11FIP2Q7L804 512 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 ANKRD37Q7Z713 158 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 SLCO6A1Q86UG4 719 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CARM1Q86X55 608 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 PACRGLQ8N7B6 248 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 OR7G1Q8NGA0 311 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 OR5K1Q8NHB7 308 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 VANGL1Q8TAA9 524 aaPredicted RBP6.45□□□□□ -1.38
PTCD2-201ENST00000308077 RASSF5Q8WWW0 418 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 FKBP10Q96AY3 582 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 LRFN5Q96NI6 719 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 LMF1Q96S06 567 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 NUDT9Q9BW91 350 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 PINK1Q9BXM7 581 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 KRTAP17-1Q9BYP8 105 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 SAP130Q9H0E3 1048 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 GPR55Q9Y2T6 319 aaPredicted RBP6.45□□□□□ -1.38
PTCD2-201ENST00000308077 TESMINQ9Y4I5 508 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 PCDHGA1Q9Y5H4 931 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 CLCA3PQ9Y6N3 262 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 ENPP4Q9Y6X5 453 aa6.45□□□□□ -1.38
PTCD2-201ENST00000308077 PCNX2A6NKB5 2137 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 CLDN24A6NM45 220 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 H0YJX3 145 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PEX12O00623 359 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 FFAR1O14842 300 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 DPM1O60762 260 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ALOX12BO75342 701 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 STX11O75558 287 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 AK1P00568 194 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ALBP02768 609 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 IFNW1P05000 195 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 HEXBP07686 556 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 UQCRBP14927 111 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 AGXTP21549 392 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PRKACGP22612 351 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 RRM2P31350 389 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 TRHRP34981 398 aaPredicted RBP6.44□□□□□ -1.38
PTCD2-201ENST00000308077 GPR143P51810 404 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PLAURQ03405 335 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ZNHIT3Q15649 155 aaPredicted RBP6.44□□□□□ -1.38
PTCD2-201ENST00000308077 NPTX1Q15818 432 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 C6orf52Q5T4I8 152 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 HES3Q5TGS1 186 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 AP1ARQ63HQ0 302 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 DHRS4L2Q6PKH6 230 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ISLR2Q6UXK2 745 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF517Q6ZMY9 492 aaPredicted RBP6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF836Q6ZNA1 936 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 GLRX5Q86SX6 157 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 STK32CQ86UX6 486 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 TSPYL5Q86VY4 417 aaPredicted RBP6.44□□□□□ -1.38
PTCD2-201ENST00000308077 C9orf40Q8IXQ3 194 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF619Q8N2I2 560 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 CLIP4Q8N3C7 705 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 SVOPLQ8N434 492 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 GALNT6Q8NCL4 622 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 DEFB124Q8NES8 71 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 OR4C15Q8NGM1 316 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 OR52P1PQ8NH57 321 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 OR14A16Q8NHC5 309 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PROX1Q92786 737 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 BTBD9Q96Q07 612 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 SPATA5L1Q9BVQ7 753 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 STRADBQ9C0K7 418 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 VCXQ9H320 206 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 MTHFD2LQ9H903 347 aaPredicted RBP6.44□□□□□ -1.38
PTCD2-201ENST00000308077 SMURF2Q9HAU4 748 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PRODH2Q9UF12 536 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PISDQ9UG56 409 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 C3orf18Q9UK00 162 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 ZNF443Q9Y2A4 671 aaPredicted RBP6.44□□□□□ -1.38
PTCD2-201ENST00000308077 PCDHGB3Q9Y5G1 929 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 LYVE1Q9Y5Y7 322 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 AGAP5A6NIR3 686 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 G3V2T6 193 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 SYT5O00445 386 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 FRS3O43559 492 aa6.44□□□□□ -1.38
PTCD2-201ENST00000308077 TPST2O60704 377 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms