RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ABOP16442 354 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 LSP1P33241 339 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GCKP35557 465 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 UQCRFS1P47985 274 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CASP9P55211 416 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FOXO1Q12778 655 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 STX5Q13190 355 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MAPRE2Q15555 327 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HYAL4Q2M3T9 481 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FLYWCH1Q4VC44 716 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 EXOSC6Q5RKV6 272 aaKnown RBP10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SLC2A7Q6PXP3 512 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CPLX4Q7Z7G2 160 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 RNF130Q86XS8 419 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SIAH3Q8IW03 269 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF614Q8N883 585 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR4K17Q8NGC6 315 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OR52N2Q8NGI0 321 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PNPT1Q8TCS8 783 aaKnown RBP10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MIPOL1Q8TD10 442 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 XAGE5Q8WWM1 108 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DEFB127Q9H1M4 99 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 RAD21L1Q9H4I0 556 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZDHHC11Q9H8X9 412 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PROK2Q9HC23 129 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SERHLQ9NQF3 203 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 C15orf41Q9Y2V0 281 aa10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ARHGAP21Q5T5U3 1957 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 A0A096LPI6 279 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 A0A1W2PP18 115 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GMNCA6NCL1 334 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 C2orf72A6NCS6 295 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TMEM247A6NEH6 219 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 H3BNH8 94 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 STX11O75558 287 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TRAPPC6AO75865 159 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PDE9AO76083 593 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 OXSR1O95747 527 aaPredicted RBP10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 IGKV1D-16P01601 117 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CAPN3P20807 821 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PPIBP23284 216 aaKnown RBP10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DCTP40126 519 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PTGDSP41222 190 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CRATP43155 626 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MAGEA8P43361 318 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MAN2A2P49641 1150 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GYS2P54840 703 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 KCNC4Q03721 635 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SLC10A1Q14973 349 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ARHGAP11BQ3KRB8 267 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MMEL1Q495T6 779 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GPAT3Q53EU6 434 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CMPK2Q5EBM0 449 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TIGD3Q6B0B8 471 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ARHGAP11AQ6P4F7 1023 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SPATA21Q7Z572 469 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PLCZ1Q86YW0 608 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 MISPQ8IVT2 679 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CHDHQ8NE62 594 aaPredicted RBP10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 FAM110BQ8TC76 370 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZFP90Q8TF47 636 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TSPEARQ8WU66 669 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GTF2H4Q92759 462 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ELAC2Q9BQ52 826 aaKnown RBP10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HOXD1Q9GZZ0 328 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SERHL2Q9H4I8 314 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF385DQ9H6B1 395 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TPT1P8Q9HAU6 139 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 UBQLN4Q9NRR5 601 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 P2RX2Q9UBL9 471 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DKKL1Q9UK85 242 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NDUFAF1Q9Y375 327 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PCNX3Q9H6A9 2034 aa10.05□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TRGV5A0A0B4J1U4 118 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NDUFB5O43674 189 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HCN1O60741 890 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CCDC22O60826 627 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 CBR3O75828 277 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 NGFRP08138 427 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 TBXA2RP21731 343 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 PTPN6P29350 595 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 SEC24CP53992 1094 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 HSF1Q00613 529 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 C17orf67Q0P5P2 114 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 UBAP2LQ14157 1087 aaKnown RBP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GPR68Q15743 365 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 GTDC1Q4AE62 458 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 DHDDSQ86SQ9 333 aa10.04□□□□□ -0.8
CSPG4P2Y-201ENST00000306853 EID3Q8N140 333 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms