RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RHOP08100 348 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 ARAFP10398 606 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 ELK1P19419 428 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 UQCRC2P22695 453 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 HYAL1Q12794 435 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 TP53I3Q53FA7 332 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 CDC73Q6P1J9 531 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 MZT2AQ6P582 158 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 KANSL1Q7Z3B3 1105 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 RSPH9Q9H1X1 276 aaPredicted RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 KLHL31Q9H511 634 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 SPATA6Q9NWH7 488 aaPredicted RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 GDE1Q9NZC3 331 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 C1orf226A1L170 272 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 CENPBD1B2RD01 187 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 GABRPO00591 440 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 KHDRBS3O75525 346 aaKnown RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 PTX3P26022 381 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 BTN3A2P78410 334 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 STX4Q12846 297 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 BCL2A1Q16548 175 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 HES5Q5TA89 166 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 FAM83HQ6ZRV2 1179 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 AMZ2Q86W34 360 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 GATSQ8NAP1 163 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 MRPS23Q9Y3D9 190 aaKnown RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 TRAV27A0A087WT01 109 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 EPOPA6NHQ4 379 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 LRRC37A5PQ49AS3 106 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 XKRXQ6PP77 449 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 METAP1DQ6UB28 335 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 COMTD1Q86VU5 262 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 PLA2G15Q8NCC3 412 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 OR4E2Q8NGC2 313 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 GINS4Q9BRT9 223 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 CACNG6Q9BXT2 260 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 BHLHE41Q9C0J9 482 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 PRDM9Q9NQV7 894 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 IL36AQ9UHA7 158 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 CHST2Q9Y4C5 530 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 A0A0B4J293 547 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 FMO6PO60774 539 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 CERS1P27544 350 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 TRIM23P36406 574 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 EIF4HQ15056 248 aaKnown RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 PARS2Q7L3T8 475 aaKnown RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF761Q86XN6 746 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 PIGXQ8TBF5 258 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 TMEM255BQ8WV15 326 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 SNX18Q96RF0 628 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 GABARAPL1Q9H0R8 117 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 C6orf106Q9H6K1 298 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 GPR55Q9Y2T6 319 aaPredicted RBP13.68□□□□□ -0.22
PTPN9-201ENST00000306726 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
PTPN9-201ENST00000306726 GFYI3L273 518 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 PI15O43692 258 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ALX3O95076 343 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ADAP00813 363 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 PTGS2P35354 604 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 RASSF6Q6ZTQ3 369 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 KLHL36Q8N4N3 616 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 AKAP1Q92667 903 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF707Q96C28 371 aaPredicted RBP13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ALG14Q96F25 216 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 THAP7Q9BT49 309 aaPredicted RBP13.67□□□□□ -0.22
PTPN9-201ENST00000306726 PCDHGB2Q9Y5G2 931 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 MYO15AQ9UKN7 3530 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 A0A087WUU8 490 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 TEX13CA0A0J9YWL9 993 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 HYKKA2RU49 373 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 PROM1O43490 865 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 LCMT2O60294 686 aaKnown RBP13.67□□□□□ -0.22
PTPN9-201ENST00000306726 LIPCP11150 499 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ACSL1P33121 698 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ADH7P40394 386 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 CCR2P41597 374 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 SEC13P55735 322 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 NANOGP1Q8N7R0 232 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 OR4M1Q8NGD0 313 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ZMYND19Q96E35 227 aaPredicted RBP13.67□□□□□ -0.22
PTPN9-201ENST00000306726 NARFLQ9H6Q4 476 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ANKRD36A6QL64 1941 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF780AO75290 641 aaPredicted RBP13.67□□□□□ -0.22
PTPN9-201ENST00000306726 SEMA7AO75326 666 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 SIX6O95475 246 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 TSPAN5P62079 268 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 BTN1A1Q13410 526 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 OR8S1Q8NH09 359 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 NUS1Q96E22 293 aa13.67□□□□□ -0.22
PTPN9-201ENST00000306726 ANKHQ9HCJ1 492 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms