RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TM6SF2Q9BZW4 377 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZCCHC2Q9C0B9 1178 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 SAP130Q9H0E3 1048 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ATG10Q9H0Y0 220 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 NLKQ9UBE8 527 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CCL26Q9Y258 94 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ANGPT4Q9Y264 503 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 GPR171O14626 319 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PRODHO43272 600 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PLPP2O43688 288 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PDE9AO76083 593 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 FGF18O76093 207 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 IGF2P01344 180 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CKMP06732 381 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TYRP14679 529 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CHI3L1P36222 383 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 ETV3P41162 512 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 DEFA1P59665 94 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 DEFA3P59666 94 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CYP4F8P98187 520 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TAGLNQ01995 201 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 CD276Q5ZPR3 534 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TMEM81Q6P7N7 255 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 WASH2PQ6VEQ5 465 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZNF793Q6ZN11 406 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PRSS42Q7Z5A4 293 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 GPR135Q8IZ08 494 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SDR16C5Q8N3Y7 309 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 Q8N402 240 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 STPG2Q8N412 459 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TCEANCQ8N8B7 351 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 DMBX1Q8NFW5 382 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 OR5AK3PQ8NH89 298 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PHOSPHO2Q8TCD6 241 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 GATAD2BQ8WXI9 593 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZG16BQ96DA0 208 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZNF681Q96N22 645 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TREX2Q9BQ50 279 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 PRRG3Q9BZD7 231 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PIGUQ9H490 435 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 FOLH1BQ9HBA9 442 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TOR4AQ9NXH8 423 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 RPL36Q9Y3U8 105 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 FKBP7Q9Y680 259 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PHF3Q92576 2039 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 MYO10Q9HD67 2058 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 EDDM13A0A1B0GTR0 161 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SLC22A23A1A5C7 686 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 FABP12A6NFH5 140 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PRR32B1ATL7 298 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 FKTNO75072 461 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 UBXN7O94888 489 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CPSF4O95639 269 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 ADH1AP07327 375 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 IRF1P10914 325 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 POU3F2P20265 443 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 PRKACBP22694 351 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 KELP23276 732 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 MMP15P51511 669 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 RPS26P62854 115 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 SYPL1Q16563 259 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 HNRNPA1L2Q32P51 320 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 DMKNQ6E0U4 476 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 Q6ZTK2 550 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SLC36A1Q7Z2H8 476 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 P3H2Q8IVL5 708 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 BBS10Q8TAM1 723 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PTP4A1Q93096 173 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 MARC2Q969Z3 335 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 RGMAQ96B86 450 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SLC25A38Q96DW6 304 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TM4SF19Q96DZ7 209 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CHFRQ96EP1 664 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 LINC00052Q96N35 136 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZNF426Q9BUY5 554 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SEMA4GQ9NTN9 838 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CLN6Q9NWW5 311 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 KIF17Q9P2E2 1029 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 PCOLCE2Q9UKZ9 415 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 A0A087WV48 116 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 CENPVL1A0A0U1RR11 272 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 FAM25AB3EWG3 89 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 FAM25CB3EWG5 89 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 FAM25GB3EWG6 89 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 DNASE2O00115 360 aaPredicted RBP5.07□□□□□ -1.6
VPS50-202ENST00000305866 SLC30A4O14863 429 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 TNFSF14O43557 240 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 SLC2A10O95528 541 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 GBAP04062 536 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 PRNPP04156 253 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 WNT1P04628 370 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 IL3P08700 152 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 SDHBP21912 280 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 AHRP35869 848 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 AVPR1BP47901 424 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 SRP9P49458 86 aaKnown RBP5.07□□□□□ -1.6
VPS50-202ENST00000305866 OR10A3P58181 314 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 CDC42P60953 191 aa5.07□□□□□ -1.6
VPS50-202ENST00000305866 RPS15P62841 145 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms