RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C2orf15Q8WU43 125 aaKnown RBP12.26□□□□□ -0.45
TRIM35-201ENST00000305364 WBP2Q969T9 261 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PDXPQ96GD0 296 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ZC3HAV1LQ96H79 300 aaKnown RBP12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PPP1R3EQ9H7J1 279 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 IFT46Q9NQC8 304 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ACSL5Q9ULC5 683 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 AK6Q9Y3D8 172 aaKnown RBP12.26□□□□□ -0.45
TRIM35-201ENST00000305364 TRBV5-4A0A0C4DH59 114 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 H3BNC9 293 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 GPR171O14626 319 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ACP5P13686 325 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 RAE1P78406 368 aaKnown RBP12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PRR5P85299 388 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PUDPQ08623 228 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 FAM27D1Q5T7N8 215 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 OR6M1Q8NGM8 313 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 BBS10Q8TAM1 723 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 TRAF4Q9BUZ4 470 aaPredicted RBP12.26□□□□□ -0.45
TRIM35-201ENST00000305364 WDR26Q9H7D7 661 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ELF5Q9UKW6 265 aaPredicted RBP12.26□□□□□ -0.45
TRIM35-201ENST00000305364 SOCS6O14544 535 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 FFAR1O14842 300 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 GRM6O15303 877 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PEX14O75381 377 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 RGS11O94810 467 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ACSM4P0C7M7 580 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 LAMP2P13473 410 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 NDUFV2P19404 249 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 VEGFCP49767 419 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ESX1Q8N693 406 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF366Q8N895 744 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 OR11H7Q8NGC8 314 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PRRC1Q96M27 445 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 GPATCH2Q9NW75 528 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
TRIM35-201ENST00000305364 PSME4Q14997 1843 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 ARRDC5A6NEK1 342 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 PRAMEF25A6NGN4 478 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 KRBOX1C9JBD0 128 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 H7BY64 318 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 SERPINA3P01011 423 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CD79BP40259 229 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CTSOP43234 321 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 PSMD4P55036 377 aaKnown RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 OR10A3P58181 314 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 DGCR2P98153 550 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 B4GALNT1Q00973 533 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 ACSM3Q53FZ2 586 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 ARSIQ5FYB1 569 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 METTL11BQ5VVY1 283 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 C17orf107Q6ZR85 190 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 ESPNLQ6ZVH7 1005 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 MRPL48Q96GC5 212 aaKnown RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 PRAP1Q96NZ9 151 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 MED20Q9H944 212 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 RPS6KB2Q9UBS0 482 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 NYNRINQ9P2P1 1898 aaKnown RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 LCTP09848 1927 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CKAP5Q14008 2032 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 GAPDHSO14556 408 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 SLC6A1P30531 599 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 FGF9P31371 208 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 PPM1AP35813 382 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 RPL4P36578 427 aaKnown RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 LIN54Q6MZP7 749 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 GET4Q7L5D6 327 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 GID4Q8IVV7 300 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CHST14Q8NCH0 376 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 FCRL1Q96LA6 429 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CD180Q99467 661 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF416Q9BWM5 594 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 PLA2G12AQ9BZM1 189 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 REV1Q9UBZ9 1251 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 Q9Y3F1 56 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 YIPF1Q9Y548 306 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 HRH3Q9Y5N1 445 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 FEZF1A0PJY2 475 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 MTNR1BP49286 362 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 RNF144AP50876 292 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-201ENST00000305364 TMEM201Q5SNT2 666 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 FAM46CQ5VWP2 391 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 FAM71E1Q6IPT2 247 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 C19orf48Q6RUI8 117 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 FRRS1Q6ZNA5 592 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CACUL1Q86Y37 369 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 CCDC36Q8IYA8 594 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 C10orf53Q8N6V4 93 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 RGMAQ96B86 450 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 SLC7A5P2Q9GIP4 190 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 MCCC2Q9HCC0 563 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 MBD2Q9UBB5 411 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 GLS2Q9UI32 602 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 THSD7AQ9UPZ6 1657 aa12.25□□□□□ -0.45
TRIM35-201ENST00000305364 OR6C74A6NCV1 312 aa12.24□□□□□ -0.45
TRIM35-201ENST00000305364 FAM25EA8MYX2 175 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms