RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ALDH6A1Q02252 535 aaKnown RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 DSG2Q14126 1118 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PHF19Q5T6S3 580 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 YOD1Q5VVQ6 348 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 FKBP10Q96AY3 582 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PITX2Q99697 317 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 OR8D2Q9GZM6 311 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 LRRN3Q9H3W5 708 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 HRKO00198 91 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PEX12O00623 359 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 NOL3O60936 208 aaKnown RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ABCB7O75027 752 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 SEMA7AO75326 666 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 SOX14O95416 240 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 EPPINO95925 133 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 DUSP3P51452 185 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 CRISP1P54107 249 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 GABARAPL2P60520 117 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 IGLV3-21P80748 117 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ENTPD8Q5MY95 495 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 KLHL17Q6TDP4 642 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM151BQ8IW70 566 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PARP8Q8N3A8 854 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ADAMTS16Q8TE57 1224 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ZC3H10Q96K80 434 aaKnown RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 NODALQ96S42 347 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 FBXO34Q9NWN3 711 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PCDHGA6Q9Y5G7 932 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ARHGAP33O14559 1287 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 KCNK2O95069 426 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 EMDP50402 254 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PROX2Q3B8N5 592 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 MRPL2Q5T653 305 aaKnown RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 TMIGD2Q96BF3 282 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF501Q96CX3 271 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 OR6C1Q96RD1 312 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 PSD2Q9BQI7 771 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 POLE3Q9NRF9 147 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 RARRES3Q9UL19 164 aa13.48□□□□□ -0.25
SHCBP1-201ENST00000303383 OSMP13725 252 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 NID1P14543 1247 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PTGES3Q15185 160 aaKnown RBP13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 NSDHLQ15738 373 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 KANSL1Q7Z3B3 1105 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 IFI44Q8TCB0 444 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 DHRS1Q96LJ7 313 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 G6PC3Q9BUM1 346 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 LAMA1P25391 3075 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 ASCC3Q8N3C0 2202 aaKnown RBP13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 KIAA0513O60268 411 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 BRINP1O60477 761 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 IMPDH2P12268 514 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 CNPY1Q3B7I2 92 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 VWA2Q5GFL6 755 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 CASP12Q6UXS9 341 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 B3GNT8Q7Z7M8 397 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 FAM181AQ8N9Y4 354 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PMM1Q92871 262 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 UBE2FQ969M7 185 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 KRCC1Q9NPI7 259 aaPredicted RBP13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 SEMA5BQ9P283 1151 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 MKL2Q9ULH7 1088 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 H3BSA7 217 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 TTKP33981 857 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 ALDH3B2P48448 385 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PSG6Q00889 435 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PIGFQ07326 219 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 NPTX1Q15818 432 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PTCHD4Q6ZW05 846 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 CLVS1Q8IUQ0 354 aaPredicted RBP13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 ENTHD1Q8IYW4 607 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 OR4D9Q8NGE8 314 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 PIGXQ8TBF5 258 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 TSLPQ969D9 159 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 LMF2Q9BU23 707 aaKnown RBP13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 RNF6Q9Y252 685 aa13.47□□□□□ -0.25
SHCBP1-201ENST00000303383 GKN3PP0CG01 181 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 NAT2P11245 290 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 HPGDP15428 266 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 S1PR1P21453 382 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 CHMP24386 653 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 OCA2Q04671 838 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 MAPK14Q16539 360 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM236Q5W0B7 351 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 HLA-DQA1Q5Y7H0 255 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 C7orf57Q8NEG2 295 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 SLC41A3Q96GZ6 507 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 SENP5Q96HI0 755 aaPredicted RBP13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 CCNB1IP1Q9NPC3 277 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 CFL2Q9Y281 166 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 VCANP13611 3396 aa13.46□□□□□ -0.25
SHCBP1-201ENST00000303383 A0A1W2PQM1 296 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 TRHRP34981 398 aaPredicted RBP13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 CXCR4P61073 352 aa13.46□□□□□ -0.26
SHCBP1-201ENST00000303383 CSNK2BP67870 215 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms