RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 SENP5Q96HI0 755 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 MFFQ9GZY8 342 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 MVB12BQ9H7P6 319 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SLC6A5Q9Y345 797 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF736B4DX44 427 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RASAL1O95294 804 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 CSF1P09603 554 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 PABPC4LP0CB38 370 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RPS26P62854 115 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 PRKCZQ05513 592 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GPR50Q13585 617 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GRB7Q14451 532 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 MS4A13Q5J8X5 152 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF704Q6ZNC4 412 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SFXN5Q8TD22 340 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ADAMTS18Q8TE60 1221 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SFXN2Q96NB2 322 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF382Q96SR6 550 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 DPH7Q9BTV6 452 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SMG9Q9H0W8 520 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 PATZ1Q9HBE1 687 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GPR160Q9UJ42 338 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 NFAT5O94916 1531 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ANHXE9PGG2 379 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 BHLHE40O14503 412 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ITGB2P05107 769 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SLURP2P0DP57 97 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF44P15621 663 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SFTPDP35247 375 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SF3A2Q15428 464 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 CYP1B1Q16678 543 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 FBXW12Q6X9E4 464 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 KBTBD6Q86V97 674 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SLC35B2Q8TB61 432 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 NDNFQ8TB73 568 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 PEX11GQ96HA9 241 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 F2RL3Q96RI0 385 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 TPPP3Q9BW30 176 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GPR174Q9BXC1 333 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 HOXD1Q9GZZ0 328 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SMOC2Q9H3U7 446 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GFOD1Q9NXC2 390 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 CA5BQ9Y2D0 317 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 OR1A2Q9Y585 309 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 MEIS3P2A8K0S8 358 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF891A8MT65 544 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 A8MVM7 634 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RFC2P35250 354 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 PTGER4P35408 488 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ETV3P41162 512 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 DIO3P55073 304 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 PTPRCAPQ14761 206 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 METTL2BQ6P1Q9 378 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SLC35F2Q8IXU6 374 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 CMIPQ8IY22 773 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 VWA5B2Q8N398 1253 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 CHTF18Q8WVB6 975 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 UHRF1Q96T88 793 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 KCNK12Q9HB15 430 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 APOBEC3BQ9UH17 382 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 MED16Q9Y2X0 877 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 WASH4PA8MWX3 477 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 LYRM1O43325 122 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RAD1O60671 282 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ADAMTS4O75173 837 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SNAPINO95295 136 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 HOXA10P31260 410 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GKP32189 559 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 KDELR2P33947 212 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GJA5P36382 358 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 NKX2-5P52952 324 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RPS18P62269 152 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF92Q03936 586 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 MSMO1Q15800 293 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 NAA40Q86UY6 237 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 FAM217AQ8IXS0 508 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 OR4N2Q8NGD1 307 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 OR1J4Q8NGS1 313 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 DPF1Q92782 380 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RBMXL1Q96E39 390 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SLC2A11Q9BYW1 496 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 POPDC3Q9HBV1 291 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 GLTPQ9NZD2 209 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 MST1RQ04912 1400 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 NID2Q14112 1375 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 A0A1W2PP55 124 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 FEZF1A0PJY2 475 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 KLF11O14901 512 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SLC16A5O15375 505 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 LEFTY1O75610 366 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 UNGP13051 313 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 DRD2P14416 443 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 UBE2G2P60604 165 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 CNN3Q15417 329 aaKnown RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF805Q5CZA5 627 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 FAM199XQ6PEV8 388 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 ABHD12BQ7Z5M8 362 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-201ENST00000302528 SULF2Q8IWU5 870 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 NT5C3BQ969T7 300 aa9.85□□□□□ -0.83
CLIP1-201ENST00000302528 RNGTTO60942 597 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms