RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 PRSS51A0A1B0GVH4 220 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 NPIPA7E9PJI5 369 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 PRRG2O14669 202 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 UBDO15205 165 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 GMFGO60234 142 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 FADS1O60427 444 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 KCNK2O95069 426 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 KCNH1O95259 989 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 NPIPA8P0DM63 369 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 CDKN2CP42773 168 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 ZFP36L2P47974 494 aaKnown RBP16.61■□□□□ 0.25
SPSB3-201ENST00000301717 PRIM2P49643 509 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 CLNS1AP54105 237 aaKnown RBP16.61■□□□□ 0.25
SPSB3-201ENST00000301717 ADORA2A-AS1P86434 159 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 VPS26BQ4G0F5 336 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 NATD1Q8N6N6 113 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 OR56A1Q8NGH5 318 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 GIN1Q9NXP7 522 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 B4GALT7Q9UBV7 327 aa16.61■□□□□ 0.25
SPSB3-201ENST00000301717 GTF3C1Q12789 2109 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 A0A1B0GVC2 190 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 CLDN1O95832 211 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 GSNP06396 782 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 IDO1P14902 403 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 CD1EP15812 388 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 CASP6P55212 293 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 SF3A3Q12874 501 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPSB3-201ENST00000301717 SNTA1Q13424 505 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 PDCD4Q53EL6 469 aaKnown RBP16.6■□□□□ 0.25
SPSB3-201ENST00000301717 DCST1Q5T197 706 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 CDC73Q6P1J9 531 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 C6orf120Q7Z4R8 191 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 MARVELD2Q8N4S9 558 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 GATSQ8NAP1 163 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 OR4C3Q8NH37 302 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 RFWD2Q8NHY2 731 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 NEIL3Q8TAT5 605 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 SFXN5Q8TD22 340 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 OR7D2Q96RA2 312 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 ACTRT3Q9BYD9 372 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 PIGUQ9H490 435 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 TCF7L2Q9NQB0 619 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 MEMO1Q9Y316 297 aa16.6■□□□□ 0.25
SPSB3-201ENST00000301717 PCNX1Q96RV3 2341 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 C15orf38-AP3S2A0A0A6YYH1 394 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 AQP7O14520 342 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 SLC22A3O75751 556 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 HPNP05981 417 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 PGRP06401 933 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 PSPHP78330 225 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 POU6F2P78424 691 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-201ENST00000301717 CDSNQ15517 529 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.59■□□□□ 0.25
SPSB3-201ENST00000301717 GXYLT1Q4G148 440 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 ANXA8L1Q5VT79 327 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 ZNF585AQ6P3V2 769 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 DNAJC14Q6Y2X3 702 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-201ENST00000301717 ACAD11Q709F0 780 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 PLCZ1Q86YW0 608 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 FAM83FQ8NEG4 500 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-201ENST00000301717 FAM110BQ8TC76 370 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 ADAMTS15Q8TE58 950 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 ACKR4Q9NPB9 350 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 SDR39U1Q9NRG7 319 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-201ENST00000301717 SLC6A13Q9NSD5 602 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 MED11Q9P086 117 aa16.59■□□□□ 0.25
SPSB3-201ENST00000301717 FAF1Q9UNN5 650 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-201ENST00000301717 KDM4EB2RXH2 506 aaPredicted RBP16.58■□□□□ 0.24
SPSB3-201ENST00000301717 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
SPSB3-201ENST00000301717 SUSD5O60279 629 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 ESRRAP11474 423 aaPredicted RBP16.58■□□□□ 0.24
SPSB3-201ENST00000301717 ELAVL4P26378 380 aaKnown RBP16.58■□□□□ 0.24
SPSB3-201ENST00000301717 COL8A1P27658 744 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 GSTA3Q16772 222 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 ZCCHC12Q6PEW1 402 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 DUSP19Q8WTR2 217 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 VPS33AQ96AX1 596 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 SLC35G5Q96KT7 338 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 CCDC115Q96NT0 180 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 OR52E6Q96RD3 313 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 ZBTB18Q99592 522 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 KLHDC3Q9BQ90 382 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 BTBD2Q9BX70 525 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 DSN1Q9H410 356 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 NPHS2Q9NP85 383 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 DUSP22Q9NRW4 184 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 FAM120CQ9NX05 1096 aaKnown RBP16.58■□□□□ 0.24
SPSB3-201ENST00000301717 QPCTLQ9NXS2 382 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 ALKBH4Q9NXW9 302 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 PPP4R1LQ9P1A2 415 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 DCTN4Q9UJW0 460 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 ACAD8Q9UKU7 415 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 PCDHGB4Q9UN71 923 aa16.58■□□□□ 0.24
SPSB3-201ENST00000301717 TTC36A6NLP5 189 aa16.57■□□□□ 0.24
SPSB3-201ENST00000301717 HCN1O60741 890 aa16.57■□□□□ 0.24
SPSB3-201ENST00000301717 EDF1O60869 148 aaKnown RBP16.57■□□□□ 0.24
SPSB3-201ENST00000301717 OXSR1O95747 527 aaPredicted RBP16.57■□□□□ 0.24
SPSB3-201ENST00000301717 MATN1P21941 496 aa16.57■□□□□ 0.24
SPSB3-201ENST00000301717 PSMD4P55036 377 aaKnown RBP16.57■□□□□ 0.24
SPSB3-201ENST00000301717 DPY19L1Q2PZI1 675 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms