RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PRODHO43272 600 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 MT-ND4P03905 459 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 ZFP36L2P47974 494 aaKnown RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 HCCSP53701 268 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 DEFA5Q01523 94 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 NDUFA9Q16795 377 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 FAM111BQ6SJ93 734 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 FAM83HQ6ZRV2 1179 aaPredicted RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 ZER1Q7Z7L7 766 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 FOXRED2Q8IWF2 684 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 SLC16A11Q8NCK7 471 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 TRMT10AQ8TBZ6 339 aaKnown RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 NXPE3Q969Y0 559 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 ZG16BQ96DA0 208 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 HRASLS2Q9NWW9 162 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 DNMT3BQ9UBC3 853 aaKnown RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 SLC23A2Q9UGH3 650 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 A0A0B4J203 849 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 TEX13CA0A0J9YWL9 993 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 A0A1W2PRQ8 180 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 GFYI3L273 518 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 GAPDHSO14556 408 aaPredicted RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 EMC8O43402 210 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 LIPCP11150 499 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 SNRPBP14678 240 aaKnown RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 TGM1P22735 817 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 TOMM20Q15388 145 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 UNC5DQ6UXZ4 953 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 LACC1Q8IV20 430 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 AMER3Q8N944 861 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 THAP3Q8WTV1 239 aaPredicted RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 TM9SF4Q92544 642 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 C7orf34Q96L11 122 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 MICU1Q9BPX6 476 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 MYNNQ9NPC7 610 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 ATP13A2Q9NQ11 1180 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 HCN3Q9P1Z3 774 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 INSL6Q9Y581 213 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 UGDHO60701 494 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 RCBTB2O95199 551 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 KAT7O95251 611 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 PLGP00747 810 aaPredicted RBP12.51□□□□□ -0.41
CASC4-201ENST00000299957 GRK6P43250 576 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 RAB28P51157 221 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 PRKCDQ05655 676 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 P2RY14Q15391 338 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 BBS1Q8NFJ9 593 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 OR52I1Q8NGK6 324 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 ARRDC3Q96B67 414 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 OR8D2Q9GZM6 311 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 TAS2R10Q9NYW0 307 aa12.51□□□□□ -0.41
CASC4-201ENST00000299957 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 C4BPBP20851 252 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 HNRNPFP52597 415 aaKnown RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 ENTPD8Q5MY95 495 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 PGBD2Q6P3X8 592 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 C7orf61Q8IZ16 206 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 TMEM255BQ8WV15 326 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 GCDHQ92947 438 aaPredicted RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 FATE1Q969F0 183 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 PTCHD1Q96NR3 888 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 C1GALT1Q9NS00 363 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 TMEM45AQ9NWC5 275 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 OR6C2Q9NZP2 312 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 CARNS1A5YM72 827 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 SLCO2B1O94956 709 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 ZNF888P0CJ79 500 aaPredicted RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 JUNDP17535 347 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 GAS6Q14393 721 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 PRICKLE2Q7Z3G6 844 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 TM4SF18Q96CE8 201 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 ZNF582Q96NG8 517 aaPredicted RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 DOK1Q99704 481 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 SLC52A3Q9NQ40 469 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 FBXO8Q9NRD0 319 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 PRELID1Q9Y255 219 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 XKRYO14609 159 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 LCMT2O60294 686 aaKnown RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 GGTA1PQ4G0N0 100 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 SYT14P1Q58G82 188 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 XKRXQ6PP77 449 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 UBE2Q1Q7Z7E8 422 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 TMPRSS12Q86WS5 348 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 FTMTQ8N4E7 242 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 VN1R2Q8NFZ6 395 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 OR13C2Q8NGS9 318 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 OR6N2Q8NGY6 317 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 UBTD2Q8WUN7 234 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 C4orf36Q96KX1 117 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 C5orf34Q96MH7 638 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 THAP7Q9BT49 309 aaPredicted RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 SPATA6Q9NWH7 488 aaPredicted RBP12.5□□□□□ -0.41
CASC4-201ENST00000299957 COMMD9Q9P000 198 aa12.5□□□□□ -0.41
CASC4-201ENST00000299957 CCL27Q9Y4X3 112 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms