RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CA3P07451 260 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RPS17P08708 135 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ERVK-25P63136 954 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RCAN2Q14206 197 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PTPRRQ15256 657 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SIX1Q15475 284 aaPredicted RBP12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 STEAP4Q687X5 459 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF619Q8N2I2 560 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FTMTQ8N4E7 242 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NEIL2Q969S2 332 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 L3HYPDHQ96EM0 354 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HAO2Q9NYQ3 351 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF225Q9UK10 706 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 WDR37Q9Y2I8 494 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MYH7P12883 1935 aa12.83□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PRAMEF2O60811 474 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PVRP15151 417 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RBMS1P29558 406 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CASP6P55212 293 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RNASE10Q5GAN6 216 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PXKQ7Z7A4 578 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KBTBD6Q86V97 674 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CD200R1Q8TD46 325 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF160Q9HCG1 818 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 BATFQ16520 125 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PLXDC1Q8IUK5 500 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SENP5Q96HI0 755 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR51E2Q9H255 320 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMEM14AQ9Y6G1 99 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NFAT5O94916 1531 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 E7ESA3 106 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SOX9P48436 509 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CAV2P51636 162 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DYRK1AQ13627 763 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 C3orf38Q5JPI3 329 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 IL20RBQ6UXL0 311 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR52R1Q8NGF1 315 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PELOQ9BRX2 385 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TRAPPC13A5PLN9 417 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF487B1APH4 448 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FANCGO15287 622 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DCNP07585 359 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HTR2AP28223 471 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RPS5P46782 204 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CYP4V2Q6ZWL3 525 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMEM150AQ86TG1 271 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR5L2Q8NGL0 311 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZFYVE21Q9BQ24 234 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CACNG6Q9BXT2 260 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MTHFD2LQ9H903 347 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACTR10Q9NZ32 417 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ARPC5O15511 151 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 BMP4P12644 408 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HOXB9P17482 250 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ENDOUP21128 410 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 EVI2BP34910 448 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF136P52737 540 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LTC4SQ16873 150 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LRRC18Q8N456 261 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CHDHQ8NE62 594 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SYNPRQ8TBG9 265 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RHBDF1Q96CC6 855 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 POTEKPQ9BYX7 375 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 B3GNT2Q9NY97 397 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LRFN1Q9P244 771 aa12.82□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PPP6CO00743 305 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PROS1P07225 676 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OSMP13725 252 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GJA5P36382 358 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMEM31Q5JXX7 168 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GPR26Q8NDV2 337 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR9K2Q8NGE7 335 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR2T4Q8NH00 348 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FOXJ1Q92949 421 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF775Q96BV0 537 aaPredicted RBP12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MYNNQ9NPC7 610 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DMRT3Q9NQL9 472 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR5K4A6NMS3 321 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SOBPA7XYQ1 873 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SNNO75324 88 aaPredicted RBP12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MT-ND4P03905 459 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MYF6P23409 242 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HRH2P25021 359 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RGS6P49758 472 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF695Q8IW36 515 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DTWD1Q8N5C7 304 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SERINC2Q96SA4 455 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HPGDSO60760 199 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DBHP09172 617 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HMGCLP35914 325 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RABIFP47224 123 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HLCSP50747 726 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RAB15P59190 212 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PSPHP78330 225 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GSTM4Q03013 218 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MBTPS1Q14703 1052 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KCTD20Q7Z5Y7 419 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms