RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 AP1ARQ63HQ0 302 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 TCTN3Q6NUS6 607 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 TMEM205Q6UW68 189 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF836Q6ZNA1 936 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF605Q86T29 641 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 CYP4Z1Q86W10 505 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 C9orf40Q8IXQ3 194 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 BCORP1Q8N888 145 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 ZSCAN1Q8NBB4 408 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 ZNF570Q96NI8 536 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 GAL3ST4Q96RP7 486 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 C19orf25Q9UFG5 118 aaPredicted RBP17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 RAB26Q9ULW5 256 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 CHST2Q9Y4C5 530 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 LYVE1Q9Y5Y7 322 aa17.14■□□□□ 0.33
SEC61A2-201ENST00000298428 C2orf92A0A1B0GVN3 265 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 TNFRSF11BO00300 401 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 PRKNO60260 465 aaPredicted RBP17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 UGT2B17O75795 530 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 ALPLP05186 524 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 SLC29A4Q7RTT9 530 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 CPEB2Q7Z5Q1 589 aaKnown RBP17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 B3GNT7Q8NFL0 401 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 OR6T1Q8NGN1 323 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 ADIPOR1Q96A54 375 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 NRBF2Q96F24 287 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 LCORQ96JN0 433 aaPredicted RBP17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 ARHGDIGQ99819 225 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 RBM4BQ9BQ04 359 aaKnown RBP17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 RBM4Q9BWF3 364 aaKnown RBP17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 NXF5Q9H1B4 397 aaKnown RBP17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 RLIMQ9NVW2 624 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 KCNE5Q9UJ90 142 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 AP4B1Q9Y6B7 739 aa17.13■□□□□ 0.33
SEC61A2-201ENST00000298428 NINQ8N4C6 2090 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 FRG2CA6NGY1 282 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 CLDN24A6NM45 220 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 OR6C76A6NM76 312 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 SEMA7AO75326 666 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 HPRP00739 348 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 FTH1P19P0C7X4 201 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 NID1P14543 1247 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PRKACGP22612 351 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 GPR143P51810 404 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 DCAF7P61962 342 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 EEF1A1P68104 462 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PPP2R2BQ00005 443 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 EIPR1Q53HC9 387 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 C3orf38Q5JPI3 329 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 C6orf52Q5T4I8 152 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 FAM69BQ5VUD6 431 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 HLA-DQA1Q5Y7H0 255 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PAPD4Q6PIY7 484 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 C6orf15Q6UXA7 325 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 CLIP4Q8N3C7 705 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 OR52J3Q8NH60 311 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 WDR36Q8NI36 951 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 LPAR4Q99677 370 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 BARD1Q99728 777 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 OSBPL11Q9BXB4 747 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 OSBPL10Q9BXB5 764 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 WWTR1Q9GZV5 400 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 GABARAPL1Q9H0R8 117 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 Q9H521 79 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 SMURF2Q9HAU4 748 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 SMPD3Q9NY59 655 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 USE1Q9NZ43 259 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PDP1Q9P0J1 537 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 KCND3Q9UK17 655 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PTRH2Q9Y3E5 179 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PCDHGA3Q9Y5H0 932 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 SPAARA0A1B0GVQ0 90 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 C9orf172C9J069 976 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 DLGAP1O14490 977 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 FFAR1O14842 300 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 DRD5P21918 477 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 DECR1Q16698 335 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 TMEM164Q5U3C3 297 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 NFAM1Q8NET5 270 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 C8orf44Q96CB5 159 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 LMF1Q96S06 567 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 WDR77Q9BQA1 342 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 RHCGQ9UBD6 479 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 PADI1Q9ULC6 663 aa17.12■□□□□ 0.33
SEC61A2-201ENST00000298428 CUL9Q8IWT3 2517 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 FRS3O43559 492 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 KLF7O75840 302 aaPredicted RBP17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 DKK1O94907 266 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 GADD45GO95257 159 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 DLGAP3O95886 979 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 CCNYL3P0C7X3 344 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 LIMK1P53667 647 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 NPTX1Q15818 432 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 NHSL2Q5HYW2 709 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 RNF220Q5VTB9 566 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 OR4C15Q8NGM1 316 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 SEMA4CQ9C0C4 833 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 ACER3Q9NUN7 267 aa17.11■□□□□ 0.33
SEC61A2-201ENST00000298428 ACAD8Q9UKU7 415 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms