RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CRABP1P29762 137 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 ERV3-1Q14264 604 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 HSD17B12Q53GQ0 312 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 HENMT1Q5T8I9 393 aaKnown RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF613Q6PF04 617 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 TIGD4Q8IY51 512 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 TESCQ96BS2 214 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 PDXPQ96GD0 296 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 ARNTLO00327 626 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 SNAP29O95721 258 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 EIF2S3P41091 472 aaKnown RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 HERV-K104P61576 105 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 GK3PQ14409 553 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 SHFQ7M4L6 423 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 UTP23Q9BRU9 249 aaKnown RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR14I1A6ND48 311 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 NME4O00746 187 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 CEBPGP53567 150 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF367Q7RTV3 350 aa16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 HOXB13Q92826 284 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 NKX1-2Q9UD57 310 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP3-201ENST00000295324 CCRL2O00421 344 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 PAGE3Q5JUK9 113 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 IL20RBQ6UXL0 311 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 SERPINA11Q86U17 422 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 LKAAEAR1Q8TD35 194 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 ELP5Q8TE02 316 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 URM1Q9BTM9 101 aaKnown RBP16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 SMURF1Q9HCE7 757 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 M0R3H8 397 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 IGLV3-27P01718 113 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 TNFRSF17Q02223 184 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 OR5D16Q8NGK9 328 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 IL21Q9HBE4 155 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLC7A7Q9UM01 511 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLCO2B1O94956 709 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 AIFM1O95831 613 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 HRGP04196 525 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 RPL34P49207 117 aaKnown RBP16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 MELKQ14680 651 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 C4orf46Q504U0 113 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 HS3ST5Q8IZT8 346 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 RAD51DO75771 328 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZNF35P13682 527 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 FUT1P19526 365 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 SCGB2B2Q4G0G5 96 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 ADIPOR2Q86V24 386 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 NETO1Q8TDF5 533 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 ARL5BQ96KC2 179 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 ZDHHC5Q9C0B5 715 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 CD93Q9NPY3 652 aa16.66■□□□□ 0.26
CDC42EP3-201ENST00000295324 PRAMEF33A0A0G2JMD5 474 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 PRAMEF10O60809 474 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 IGFBP6P24592 240 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLCO4C1Q6ZQN7 724 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SLC37A2Q8TED4 501 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 MBNL1Q9NR56 388 aaKnown RBP16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 EMC3Q9P0I2 261 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SPEF1Q9Y4P9 236 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDKN2CP42773 168 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 MAGEA8P43361 318 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 ADAM15Q13444 863 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 LHFPL3Q86UP9 236 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 NEDD4LQ96PU5 975 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 KIR3DX1Q9H7L2 352 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SPHK1Q9NYA1 384 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 MMACHCQ9Y4U1 282 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 THBS2P35442 1172 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 REEP5Q00765 189 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 DPTQ07507 201 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 PAQR7Q86WK9 346 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 UBTD2Q8WUN7 234 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 TMEM239Q8WW34 195 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 VNN3Q9NY84 501 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SH3BGRL2Q9UJC5 107 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 KNL1Q8NG31 2342 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 CDC14CA4D256 554 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 CENPBD1B2RD01 187 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 L7N2F9 121 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 ACVR1BP36896 505 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 VAMP2P63027 116 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 MAT1AQ00266 395 aaKnown RBP16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 HYAL1Q12794 435 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SFT2D3Q587I9 215 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 C3orf38Q5JPI3 329 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 NKAIN2Q5VXU1 208 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 TUBA3EQ6PEY2 450 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 FGF14Q92915 247 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 MRGPRX1Q96LB2 322 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SORT1Q99523 831 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 SMOXQ9NWM0 555 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 C5orf51A6NDU8 294 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 PPP6CO00743 305 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 PIN1Q13526 163 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 C6orf141Q5SZD1 244 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 METRNLQ641Q3 311 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 TMEM121BQ9BXQ6 578 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 TWSG1Q9GZX9 223 aa16.65■□□□□ 0.26
CDC42EP3-201ENST00000295324 LTB4R2Q9NPC1 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms