RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MEDAGQ5VYS4 303 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 TMEM236Q5W0B7 351 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 TMEM71Q6P5X7 295 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 KLHL17Q6TDP4 642 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 USP53Q70EK8 1073 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 C6orf120Q7Z4R8 191 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 CCDC116Q8IYX3 515 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 CA13Q8N1Q1 262 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 D2HGDHQ8N465 521 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 ARHGEF39Q8N4T4 335 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 LINC00471Q8N535 108 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 RNF217Q8TC41 542 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 KLHL6Q8WZ60 621 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 RPL3LQ92901 407 aaKnown RBP15.69■□□□□ 0.1
CPSF4-201ENST00000292476 TMEM19Q96HH6 336 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 SLC41A2Q96JW4 573 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF354BQ96LW1 612 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF681Q96N22 645 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 KLHL3Q9UH77 587 aa15.69■□□□□ 0.1
CPSF4-201ENST00000292476 H0YIG0 161 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 BCHEP06276 602 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 IFI6P09912 130 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 OSMP13725 252 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 CHMP24386 653 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 GADD45AP24522 165 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 SLC15A1P46059 708 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 PSMD7P51665 324 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 XKP51811 444 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 ILKQ13418 452 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 GNA13Q14344 377 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 DUSP7Q16829 419 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 C19orf48Q6RUI8 117 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 BTLAQ7Z6A9 289 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 EGFL6Q8IUX8 553 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 GPR135Q8IZ08 494 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 MVB12AQ96EY5 273 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 C10orf90Q96M02 699 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 Q96MT0 163 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 UCK2Q9BZX2 261 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 ZCCHC3Q9NUD5 404 aaKnown RBP15.68■□□□□ 0.1
CPSF4-201ENST00000292476 GPR83Q9NYM4 423 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 SERTAD3Q9UJW9 196 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.68■□□□□ 0.1
CPSF4-201ENST00000292476 MRPS2Q9Y399 296 aaKnown RBP15.68■□□□□ 0.1
CPSF4-201ENST00000292476 UGT2A1Q9Y4X1 527 aa15.68■□□□□ 0.1
CPSF4-201ENST00000292476 GOLGA4Q13439 2230 aaKnown RBP15.68■□□□□ 0.1
CPSF4-201ENST00000292476 CPED1A4D0V7 1026 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 EMC8O43402 210 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 PRKRAO75569 313 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 SERPINB7O75635 380 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 STSP08842 583 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF883P0CG24 379 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 IMPDH2P12268 514 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 RNH1P13489 461 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 FEN1P39748 380 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 KCNJ5P48544 419 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 GSSP48637 474 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 BIKQ13323 160 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 SYT16Q17RD7 645 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 SLX4IPQ5VYV7 408 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 RNLSQ5VYX0 342 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 DGLUCYQ7Z3D6 616 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 EID2Q8N6I1 236 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 B3GNT7Q8NFL0 401 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 GPR32P1Q8NGA4 272 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 TMEM121BQ9BXQ6 578 aaPredicted RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ALOXE3Q9BYJ1 711 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF768Q9H5H4 540 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 STARD5Q9NSY2 213 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 P2RX2Q9UBL9 471 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 HMGN4O00479 90 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 CYR61O00622 381 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 CLDN4O14493 209 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 FFAR1O14842 300 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 HCRTR1O43613 425 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 OR2B3O76000 313 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 GPR75O95800 540 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 GASTP01350 101 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 H1F0P07305 194 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ANKRD34CP0C6C1 535 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 RGS6P49758 472 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 KHKP50053 298 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ALDH6A1Q02252 535 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 TP53BP2Q13625 1128 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF181Q2M3W8 571 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ARMCX4Q5H9R4 360 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 PLAG1Q6DJT9 500 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 FAM180BQ6P0A1 224 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 PLEKHG7Q6ZR37 379 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 PTCHD4Q6ZW05 846 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 OR9A4Q8NGU2 314 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 SUN3Q8TAQ9 357 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 UCN3Q969E3 161 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 GTPBP3Q969Y2 492 aaKnown RBP15.67■□□□□ 0.1
CPSF4-201ENST00000292476 SLC35G5Q96KT7 338 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 NEURL2Q9BR09 285 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 SELENONQ9NZV5 590 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
CPSF4-201ENST00000292476 ZNF860A6NHJ4 632 aa15.66■□□□□ 0.1
CPSF4-201ENST00000292476 SGK494L7N484 410 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms