RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 MC3RP41968 323 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 SLC6A8P48029 635 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 PCYT1AP49585 367 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 PNLIPRP2P54317 469 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 DSCR4P56555 118 aaPredicted RBP8.05□□□□□ -1.12
TPM3-201ENST00000271850 SIRPAP78324 504 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 KRTAP1-1Q07627 177 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 CSTF3Q12996 717 aaKnown RBP8.05□□□□□ -1.12
TPM3-201ENST00000271850 GAB1Q13480 694 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 CAPRIN1Q14444 709 aaKnown RBP8.05□□□□□ -1.12
TPM3-201ENST00000271850 BCL2A1Q16548 175 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 SHEQ5VZ18 495 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 C8orf74Q6P047 294 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 GALNT18Q6P9A2 607 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 AAGABQ6PD74 315 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 GGNQ86UU5 652 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 SLC44A2Q8IWA5 706 aaPredicted RBP8.05□□□□□ -1.12
TPM3-201ENST00000271850 UBQLNLQ8IYU4 475 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 FNDC9Q8TBE3 224 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 MZB1Q8WU39 189 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 TMCO6Q96DC7 493 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 ERP27Q96DN0 273 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 MTBPQ96DY7 904 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 Q96MF0 132 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 PIP5K1AQ99755 562 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 FAIM2Q9BWQ8 316 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 GLIPR2Q9H4G4 154 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 GSTO2Q9H4Y5 243 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 SLC35C2Q9NQQ7 365 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 SIRT5Q9NXA8 310 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 DKKL1Q9UK85 242 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 ADAM21Q9UKJ8 722 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 EMCNQ9ULC0 261 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 TMCO1Q9UM00 188 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 ZNF780BQ9Y6R6 833 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 SONP18583 2426 aaKnown RBP8.05□□□□□ -1.12
TPM3-201ENST00000271850 ATRQ13535 2644 aa8.05□□□□□ -1.12
TPM3-201ENST00000271850 DSCAMO60469 2012 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 GXYLT2A0PJZ3 443 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 SERTM1A2A2V5 107 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 SLC22A20A6NK97 555 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.12
TPM3-201ENST00000271850 SUPT7LO94864 414 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 PLAUP00749 431 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 JUNP05412 331 aaKnown RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 NID1P14543 1247 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 DDCP20711 480 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 ADSLP30566 484 aaPredicted RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 PHBP35232 272 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 MAP3K8P41279 467 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 SERPINB9P50453 376 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 ZNF155Q12901 538 aaPredicted RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 STX5Q13190 355 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 EFR3AQ14156 821 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 RASA2Q15283 850 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 ACKR1Q16570 336 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 CTU2Q2VPK5 515 aaKnown RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 ANKRD34AQ69YU3 496 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 FAM71E1Q6IPT2 247 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 TMEM107Q6UX40 140 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 TIFABQ6ZNK6 161 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 GPRIN3Q6ZVF9 776 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 ZAR1Q86SH2 424 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 MARCH3Q86UD3 253 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 FAM9CQ8IZT9 166 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 LRRC75A-AS1Q8N1F1 130 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 OR2L13Q8N349 312 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 METTL25Q8N6Q8 603 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 CNEP1R1Q8N9A8 125 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 ZNF610Q8N9Z0 462 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 C1GALT1C1Q96EU7 318 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 PIK3IP1Q96FE7 263 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 PGM2Q96G03 612 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 ADGRG7Q96K78 797 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 PINK1Q9BXM7 581 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 PFDN4Q9NQP4 134 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 PSME2Q9UL46 239 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 C19orf53Q9UNZ5 99 aaPredicted RBP8.04□□□□□ -1.12
TPM3-201ENST00000271850 CCL27Q9Y4X3 112 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
TPM3-201ENST00000271850 HIVEP2P31629 2446 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 A0A087WV62 115 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 IGLV3-32A0A0A0MS00 114 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 G3V2L1 256 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 H3BML4 177 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 SEC14L5O43304 696 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 EMC8O43402 210 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 KLF4O43474 513 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 ULK1O75385 1050 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 TNFRSF21O75509 655 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 BCAS2O75934 225 aaPredicted RBP8.03□□□□□ -1.12
TPM3-201ENST00000271850 ESRRBO95718 433 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 CRHP06850 196 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 CD8BP10966 210 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 PEPDP12955 493 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 HK1P19367 917 aa8.03□□□□□ -1.12
TPM3-201ENST00000271850 IMPDH1P20839 514 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms