RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CNR1P21554 472 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 PTGDSP41222 190 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 PRIM2P49643 509 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 POU6F2P78424 691 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 ELOAQ14241 798 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 INAQ16352 499 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 C3AR1Q16581 482 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 NDUFAF6Q330K2 333 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 DCST2Q5T1A1 773 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 C1QL3Q5VWW1 255 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF324BQ6AW86 544 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 RPUSD3Q6P087 351 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 BLOC1S3Q6QNY0 202 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 MARCH3Q86UD3 253 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 SIAH3Q8IW03 269 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 GPALPP1Q8IXQ4 340 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 POU5F2Q8N7G0 328 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 OR4C3Q8NH37 302 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 SFXN5Q8TD22 340 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 XAGE5Q8WWM1 108 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 KLHDC3Q9BQ90 382 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 SLC39A3Q9BRY0 314 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 NMUR2Q9GZQ4 415 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 EXO5Q9H790 373 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 FBXL2Q9UKC9 423 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 MKLN1Q9UL63 735 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 KIAA1549Q9HCM3 1950 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 A0A1B0GTH9 108 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 ASNA1O43681 348 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 FCMRO60667 390 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 CBX6O95503 412 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 ETFAP13804 333 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 MATN1P21941 496 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 UQCRC2P22695 453 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 MAP3K8P41279 467 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 FUT5Q11128 374 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 GPR68Q15743 365 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 C16orf62Q7Z3J2 963 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 PACS2Q86VP3 889 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 C10orf111Q8N326 155 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 GTF2H4Q92759 462 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 BARD1Q99728 777 aaKnown RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 TBL1XR1Q9BZK7 514 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 IKZF5Q9H5V7 419 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZNF385DQ9H6B1 395 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 ZFP64Q9NPA5 681 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 CNIH4Q9P003 139 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 NTMQ9P121 344 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 BTNL2Q9UIR0 455 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 BOKQ9UMX3 212 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 TRIM33Q9UPN9 1127 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 RPH3AQ9Y2J0 694 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 WIF1Q9Y5W5 379 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 MPDZO75970 2070 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 DCHS2Q6V1P9 2916 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
DEPDC1B-201ENST00000265036 TRGV8A0A0C4DH27 118 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 LOC100653049A0A140TA62 436 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 PRAMEF27A3QJZ7 478 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 SHISA8B8ZZ34 492 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 NPIPA2E9PIF3 369 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 NPIPA3F8WFD2 350 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 SEMA7AO75326 666 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 KRT34O76011 436 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 WISP1O95388 367 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 OXSR1O95747 527 aaPredicted RBP6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 IL33O95760 270 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 TPOP07202 933 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 NUDT7P0C024 238 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 RNF224P0DH78 156 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 PTPN6P29350 595 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 CRATP43155 626 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 MAN2A2P49641 1150 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 CD226Q15762 336 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 CYP27C1Q4G0S4 372 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 FLYWCH1Q4VC44 716 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 EIPR1Q53HC9 387 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 SAXO2Q658L1 398 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 SPATA21Q7Z572 469 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 YRDCQ86U90 279 aaKnown RBP6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 RETREG3Q86VR2 466 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 FJX1Q86VR8 437 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 SLC22A16Q86VW1 577 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 MSRB3Q8IXL7 192 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 NATD1Q8N6N6 113 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 POGLUT1Q8NBL1 392 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 OR5M9Q8NGP3 310 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 OR5M1Q8NGP8 315 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 OR1J4Q8NGS1 313 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 TMCO6Q96DC7 493 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 ITCHQ96J02 903 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 GPR137Q96N19 417 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 PIGUQ9H490 435 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 LDAHQ9H6V9 325 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 RMND5AQ9H871 391 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 TPT1P8Q9HAU6 139 aa6.61□□□□□ -1.35
DEPDC1B-201ENST00000265036 DUSP22Q9NRW4 184 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms