RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MARCH3Q86UD3 253 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 EXOC3L1Q86VI1 746 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 FADS6Q8N9I5 356 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 CDRT4Q8N9R6 151 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 OR2M3Q8NG83 312 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 OR4K17Q8NGC6 315 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 DUSP19Q8WTR2 217 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 PIK3R3Q92569 461 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 SFXN2Q96NB2 322 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 UCN2Q96RP3 112 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 RTN4RQ9BZR6 473 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 SSU72Q9NP77 194 aaKnown RBP14.58□□□□□ -0.08
USE1-201ENST00000263897 EQTNQ9NQ60 294 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 MED11Q9P086 117 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 DKKL1Q9UK85 242 aa14.58□□□□□ -0.08
USE1-201ENST00000263897 MED12LQ86YW9 2145 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 SCAMP2O15127 329 aaKnown RBP14.57□□□□□ -0.08
USE1-201ENST00000263897 BIRC5O15392 142 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 SKAP2O75563 359 aaPredicted RBP14.57□□□□□ -0.08
USE1-201ENST00000263897 UTS2O95399 124 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 IGKV1D-16P01601 117 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 LAMP1P11279 417 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 ZNF708P17019 499 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 EFNA1P20827 205 aaPredicted RBP14.57□□□□□ -0.08
USE1-201ENST00000263897 CTSSP25774 331 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 HPCAL1P37235 193 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 RPL3P39023 403 aaKnown RBP14.57□□□□□ -0.08
USE1-201ENST00000263897 RFX3P48380 749 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 LHX2P50458 406 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 B3GALT5-AS1P59052 145 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 BCL2A1Q16548 175 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 FBXL19-AS1Q494R0 122 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 IL23RQ5VWK5 629 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 SLC16A11Q8NCK7 471 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 OR7A2PQ8NGA2 310 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 PPP1R14CQ8TAE6 165 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 FAM110BQ8TC76 370 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 SLC9A6Q92581 669 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 PKNOX2Q96KN3 472 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 ZNF559Q9BR84 538 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 G6PC3Q9BUM1 346 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 RPH3AQ9Y2J0 694 aaPredicted RBP14.57□□□□□ -0.08
USE1-201ENST00000263897 L3MBTL1Q9Y468 752 aa14.57□□□□□ -0.08
USE1-201ENST00000263897 CSMD1Q96PZ7 3565 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 WDR91A4D1P6 747 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 ESPNB1AK53 854 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 H0Y3Z8 333 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 ITM2AO43736 263 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 LYPLA1O75608 230 aaPredicted RBP14.56□□□□□ -0.08
USE1-201ENST00000263897 HSPA4LO95757 839 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 SERPINE1P05121 402 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 TUBBP07437 444 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 ACP2P11117 423 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 OPRM1P35372 400 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 ASCL1P50553 236 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 CLDN18P56856 261 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 PRR5P85299 388 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 C17orf67Q0P5P2 114 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 MYBPHQ13203 477 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 PTGR1Q14914 329 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 TNFAIP8L3Q5GJ75 292 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 CPTPQ5TA50 214 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 MFSD12Q6NUT3 480 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 ZCCHC12Q6PEW1 402 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 APOOLQ6UXV4 268 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 C9orf106Q8NAJ2 232 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 FNDC5Q8NAU1 212 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 NUDT8Q8WV74 236 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 WNT2BQ93097 391 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 TUBGCP3Q96CW5 907 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 COQ8BQ96D53 544 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 LRRC46Q96FV0 321 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 RMND5BQ96G75 393 aaPredicted RBP14.56□□□□□ -0.08
USE1-201ENST00000263897 C16orf58Q96GQ5 468 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 MS4A4EQ96PG1 132 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 TM9SF2Q99805 663 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 SH3GL2Q99962 352 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 C1orf50Q9BV19 199 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 PTGES2Q9H7Z7 377 aa14.56□□□□□ -0.08
USE1-201ENST00000263897 ZNF395Q9H8N7 513 aaPredicted RBP14.56□□□□□ -0.08
USE1-201ENST00000263897 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
USE1-201ENST00000263897 OTOGQ6ZRI0 2925 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 CLCA1A8K7I4 914 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 TM9SF1O15321 606 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 RCBTB2O95199 551 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 ANGPTL1O95841 491 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 IL18BPO95998 194 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 DHRS4L1P0CG22 281 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 PEPDP12955 493 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 HK1P19367 917 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 TCEA1P23193 301 aaKnown RBP14.55□□□□□ -0.08
USE1-201ENST00000263897 UQCRC1P31930 480 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 PEX19P40855 299 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 AGFG1P52594 562 aaKnown RBP14.55□□□□□ -0.08
USE1-201ENST00000263897 DGKQP52824 942 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 DIO3P55073 304 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 STX5Q13190 355 aa14.55□□□□□ -0.08
USE1-201ENST00000263897 MPP2Q14168 576 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms