RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 UBLCP1Q8WVY7 318 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 SLC9A6Q92581 669 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 KLHL4Q9C0H6 718 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 OPN3Q9H1Y3 402 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 MYNNQ9NPC7 610 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 FAM120CQ9NX05 1096 aaKnown RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 C6orf203Q9P0P8 240 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 SH3BP4Q9P0V3 963 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 MID2Q9UJV3 735 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 C19orf53Q9UNZ5 99 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 WBP11Q9Y2W2 641 aaKnown RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 EMC9Q9Y3B6 208 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 ABCA4P78363 2273 aa11.07□□□□□ -0.64
TRAF4-202ENST00000262396 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-202ENST00000262396 AKAP6Q13023 2319 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 FAM171A2A8MVW0 826 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 C16orf97H3BN30 126 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 SLC28A1O00337 649 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 COPEO14579 308 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 EIF1AYO14602 144 aaKnown RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 TNFRSF21O75509 655 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 RSL1D1O76021 490 aaKnown RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 UTS2O95399 124 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 SYNGR4O95473 234 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 UROSP10746 265 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 PRPS2P11908 318 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 FPR1P21462 350 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 ME2P23368 584 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 ECHS1P30084 290 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 EIF1AXP47813 144 aaKnown RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 ZNF41P51814 821 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 MANFP55145 182 aaKnown RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 PSG6Q00889 435 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 PON3Q15166 354 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 SHEQ5VZ18 495 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 VWA1Q6PCB0 445 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 BIVMQ86UB2 503 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 WFDC11Q8NEX6 87 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 OR2M3Q8NG83 312 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 CEP70Q8NHQ1 597 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 FIG4Q92562 907 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 JADE3Q92613 823 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 PIGTQ969N2 578 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 PPCDCQ96CD2 204 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 ELP4Q96EB1 424 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 POM121Q96HA1 1249 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 C18orf12Q96KH6 178 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 CCL19Q99731 98 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 GLIPR2Q9H4G4 154 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 GSX1Q9H4S2 264 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 GSTO2Q9H4Y5 243 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 PLEKHF2Q9H8W4 249 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 ELOVL5Q9NYP7 299 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 MCTS1Q9ULC4 181 aaKnown RBP11.06□□□□□ -0.64
TRAF4-202ENST00000262396 VDAC3Q9Y277 283 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 ZNF337Q9Y3M9 751 aa11.06□□□□□ -0.64
TRAF4-202ENST00000262396 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 OR2M5A3KFT3 312 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 UPK1AO00322 258 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 AKAP10O43572 662 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 HCRTR2O43614 444 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 TNFSF13O75888 250 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 IL33O95760 270 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 ANGPTL1O95841 491 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 CPA3P15088 417 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 FOXA1P55317 472 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 CLDN15P56746 228 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 PDSS1Q5T2R2 415 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 FAM71E1Q6IPT2 247 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 ALKBH2Q6NS38 261 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 CLEC9AQ6UXN8 241 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 Q71RC1 249 aaPredicted RBP11.05□□□□□ -0.64
TRAF4-202ENST00000262396 BTLAQ7Z6A9 289 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 ADGRE4PQ86SQ3 457 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 STK32CQ86UX6 486 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 WDR75Q8IWA0 830 aaKnown RBP11.05□□□□□ -0.64
TRAF4-202ENST00000262396 FADS6Q8N9I5 356 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 FNDC9Q8TBE3 224 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 STARD4Q96DR4 205 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 C1GALT1C1Q96EU7 318 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 ZBED6CLQ96FA7 236 aaPredicted RBP11.05□□□□□ -0.64
TRAF4-202ENST00000262396 REXO5Q96IC2 774 aaKnown RBP11.05□□□□□ -0.64
TRAF4-202ENST00000262396 AMDHD1Q96NU7 426 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 WFIKKN1Q96NZ8 548 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 LRTM1Q9HBL6 345 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 SIRT5Q9NXA8 310 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 ZNF175Q9Y473 711 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 TESMINQ9Y4I5 508 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 AP4B1Q9Y6B7 739 aa11.05□□□□□ -0.64
TRAF4-202ENST00000262396 ITPR3Q14573 2671 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 MTORP42345 2549 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 C17orf51A8MQB3 221 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 SCDO00767 359 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 CTIFO43310 598 aaKnown RBP11.04□□□□□ -0.64
TRAF4-202ENST00000262396 EMC8O43402 210 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 FADS1O60427 444 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 INHBBP09529 407 aa11.04□□□□□ -0.64
TRAF4-202ENST00000262396 NEFHP12036 1026 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms