RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 RDH10Q8IZV5 341 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 OR9A2Q8NGT5 310 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 C17orf50Q8WW18 174 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 DEDD2Q8WXF8 326 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 GAS2L1Q99501 681 aaPredicted RBP13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 FAIM2Q9BWQ8 316 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 OR51V1Q9H2C8 321 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 EXTL2Q9UBQ6 330 aa13.56□□□□□ -0.24
SFSWAP-201ENST00000261674 ADH1CP00326 375 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 MRPL3P09001 348 aaKnown RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 PAICSP22234 425 aaKnown RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 TRHRP34981 398 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 RUNX3Q13761 415 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 FCRLBQ6BAA4 426 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 ARL9Q6T311 187 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 LRRTM4Q86VH4 590 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 LINC01555Q8NAE3 123 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 SLC37A3Q8NCC5 494 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 PIGXQ8TBF5 258 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 GANCQ8TET4 914 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 TMEM245Q9H330 911 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 EPHX3Q9H6B9 360 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 ISG20L2Q9H9L3 353 aaKnown RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF624Q9P2J8 865 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 PLEKHM1Q9Y4G2 1056 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 A0A0G2JMP0 313 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 A0A0X1KG70 313 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 HLA-DPB1P04440 258 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 CPN2P22792 545 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 CERS1P27544 350 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 GABRA5P31644 462 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 PPP3R1P63098 170 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 CSNK1G2P78368 415 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 FAPQ12884 760 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 TPBGQ13641 420 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 NDUFA9Q16795 377 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 MTFR2Q6P444 385 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 OR4M2Q8NGB6 313 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 CNRIP1Q96F85 164 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 MCHR1Q99705 422 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 C6orf106Q9H6K1 298 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
SFSWAP-201ENST00000261674 A0A1W2PR48 441 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 INMT-MINDY4F8WBC2 141 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 STK25O00506 426 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SCO2O43819 266 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 OR2B3O76000 313 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ALPPP05187 535 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ALAS2P22557 587 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 IFNGR2P38484 337 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SRP54P61011 504 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 PLBD1Q6P4A8 553 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 QSOX2Q6ZRP7 698 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 BBS10Q8TAM1 723 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 TMEM255BQ8WV15 326 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SENP5Q96HI0 755 aaPredicted RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 LRIG1Q96JA1 1093 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 TEX12Q9BXU0 123 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 S1PR5Q9H228 398 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 RBFOX1Q9NWB1 397 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ING3Q9NXR8 418 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 NDOR1Q9UHB4 597 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 CNTRLQ7Z7A1 2325 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 C2CD4DB7Z1M9 353 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 PAHP00439 452 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 GSTM3P21266 225 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 DDX6P26196 483 aaKnown RBP eCLIP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 GNG2P59768 71 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 BNC1Q01954 994 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ID2Q02363 134 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SLC3A1Q07837 685 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 FUT5Q11128 374 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF628Q5EBL2 1059 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 KLHL36Q8N4N3 616 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ACOT4Q8N9L9 421 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 NUP43Q8NFH3 380 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 OR10H4Q8NGA5 316 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 OR5K2Q8NHB8 316 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ARHGAP9Q9BRR9 750 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 BEX1Q9HBH7 125 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 KLHL28Q9NXS3 571 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 EXOSC1Q9Y3B2 195 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 NCOR1O75376 2440 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 C17orf113A0A1B0GUU1 675 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 MEN1O00255 615 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 AKAP8O43823 692 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 TRAM2Q15035 370 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 GPR68Q15743 365 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 ZNF658BQ4V348 819 aaPredicted RBP13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 CCNJQ5T5M9 372 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 DEFB123Q8N688 67 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 SIMC1Q8NDZ2 872 aa13.54□□□□□ -0.24
SFSWAP-201ENST00000261674 OR4Q3Q8NH05 313 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms