RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 MCM3APO60318 1980 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 BLOC1S5-TXNDC5H3BN57 136 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 RGS13O14921 159 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 GPR50Q13585 617 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 TCTE1Q5JU00 501 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 TMEM185AQ8NFB2 350 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 WDR20Q8TBZ3 569 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 TREX2Q9BQ50 279 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-201ENST00000261646 DPH1Q9BZG8 443 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 FBXO10Q9UK96 956 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 TTC3P53804 2025 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 PIP5K1CO60331 668 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 PRSS23O95084 383 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 ACTC1P68032 377 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 ACTA1P68133 377 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 PUM1Q14671 1186 aaKnown RBP eCLIP15.29■□□□□ 0.041e-7■■■■□ 20.6
SREBF1-201ENST00000261646 EIF5AL1Q6IS14 154 aaKnown RBP15.29■□□□□ 0.04
SREBF1-201ENST00000261646 CBARPQ8N350 705 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-201ENST00000261646 L3MBTL4Q8NA19 623 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 C1QTNF7Q9BXJ2 289 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 WDR26Q9H7D7 661 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 DMRT3Q9NQL9 472 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 ERVK-19Q9WJR5 959 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 METTL21EPA6NDL7 271 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 GOSR2O14653 212 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 KLK8O60259 260 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 PRAF2O60831 178 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 AGR2O95994 175 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 ACRP10323 421 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 SNRPBP14678 240 aaKnown RBP15.29■□□□□ 0.04
SREBF1-201ENST00000261646 ETV6P41212 452 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 FXYD6P3P58550 94 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 GK2Q14410 553 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-201ENST00000261646 MLIPQ5VWP3 458 aa15.29■□□□□ 0.04
SREBF1-201ENST00000261646 POLDIP3Q9BY77 421 aaKnown RBP15.29■□□□□ 0.04
SREBF1-201ENST00000261646 SRP9P49458 86 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 RFLNAQ6ZTI6 216 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 OR4M1Q8NGD0 313 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 MYLIPQ8WY64 445 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 FOXJ1Q92949 421 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 DCLRE1CQ96SD1 692 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 KATNB1Q9BVA0 655 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 IL36AQ9UHA7 158 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 LIPT1Q9Y234 373 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 COL5A3P25940 1745 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 DOCK5Q9H7D0 1870 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 F8W036 122 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 SC5DO75845 299 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 DBIP07108 87 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 UCHL1P09936 223 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 AK4P27144 223 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 HSD17B2P37059 387 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ART1P52961 327 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 EIF5AP63241 154 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 BLOC1S1P78537 153 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 BCL2A1Q16548 175 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 MINDY4Q4G0A6 757 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 GET4Q7L5D6 327 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 TAS1R1Q7RTX1 841 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 PTOV1Q86YD1 416 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 OR4K13Q8NH42 304 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 NSMAFQ92636 917 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ZNF285Q96NJ3 590 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 PKMYT1Q99640 499 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 NOX3Q9HBY0 568 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ASIC5Q9NY37 505 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 KRBOX1C9JBD0 128 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ADAM12O43184 909 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 PEX14O75381 377 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 FARS2O95363 451 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 TSPAN12O95859 305 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 C8AP07357 584 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 CBLP22681 906 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ETV5P41161 510 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ETV1P50549 477 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 GALK2Q01415 458 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 GGTA1PQ4G0N0 100 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 PIP5KL1Q5T9C9 394 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 SIAH3Q8IW03 269 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ADGRF3Q8IZF5 1079 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ZNF350Q9GZX5 532 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 CST11Q9H112 138 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 FBXL12Q9NXK8 326 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 UBXN7O94888 489 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 GYPBP06028 91 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ELAVL4P26378 380 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 MC2RQ01718 297 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 KHDRBS2Q5VWX1 349 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 ZNF454Q8N9F8 522 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 FCRL1Q96LA6 429 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 POTEKPQ9BYX7 375 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 METTL8Q9H825 291 aaKnown RBP15.28■□□□□ 0.04
SREBF1-201ENST00000261646 EVA1BQ9NVM1 165 aa15.28■□□□□ 0.04
SREBF1-201ENST00000261646 RAF1P04049 648 aa15.27■□□□□ 0.04
SREBF1-201ENST00000261646 MAS1P04201 325 aa15.27■□□□□ 0.04
SREBF1-201ENST00000261646 HMGN2P05204 90 aaKnown RBP15.27■□□□□ 0.04
SREBF1-201ENST00000261646 ZNF8P17098 575 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-201ENST00000261646 MAPK3P27361 379 aaPredicted RBP15.27■□□□□ 0.04
SREBF1-201ENST00000261646 AGTR1P30556 359 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms