RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 YIPF7Q8N8F6 280 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 POGLUT1Q8NBL1 392 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 ATP6V1C2Q8NEY4 427 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 NLGN4YQ8NFZ3 816 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 OR52P1PQ8NH57 321 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 ZFPM2Q8WW38 1151 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 DEDD2Q8WXF8 326 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 TMCO6Q96DC7 493 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SENP5Q96HI0 755 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 FERD3LQ96RJ6 166 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 FNDC11Q9BVV2 318 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 HDHD5Q9BXW7 423 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OSGEPL1Q9H4B0 414 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 EQTNQ9NQ60 294 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 MRPS18AQ9NVS2 196 aaKnown RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 A0A1W2PPK0 400 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 CPSF4LA6NMK7 179 aaKnown RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 PLA2G10O15496 165 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 CEACAM5P06731 702 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SLC35G4P0C7Q5 338 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SLC2A2P11168 524 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 ATP5A1P25705 553 aaKnown RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 GPC1P35052 558 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 FXYD6P3P58550 94 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 SLC30A6Q6NXT4 461 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 KRT73Q86Y46 540 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 ARIH2OSQ8N7S6 290 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 BEST4Q8NFU0 473 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OR4F15Q8NGB8 312 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OR52E1Q8NGJ3 308 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 FGF13Q92913 245 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 RNFT2Q96EX2 444 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 ZFP3Q96NJ6 502 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 OR7D2Q96RA2 312 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 SPRTNQ9H040 489 aaPredicted RBP9.47□□□□□ -0.89
COPB1-201ENST00000249923 SLC6A17Q9H1V8 727 aa9.47□□□□□ -0.89
COPB1-201ENST00000249923 TNFRSF10AO00220 468 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 KLF4O43474 513 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 PEPDP12955 493 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 F3P13726 295 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 FUT1P19526 365 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 APEX1P27695 318 aaKnown RBP9.46□□□□□ -0.89
COPB1-201ENST00000249923 TIE1P35590 1138 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 GSTM5P46439 218 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 RAB28P51157 221 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 LRRC32Q14392 662 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 GDPGP1Q6ZNW5 385 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 NOXA1Q86UR1 476 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 TMEM163Q8TC26 289 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 ARHGDIGQ99819 225 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 PLA2G2FQ9BZM2 168 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 C11orf54Q9H0W9 315 aaPredicted RBP9.46□□□□□ -0.89
COPB1-201ENST00000249923 C11orf49Q9H6J7 331 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 B3GAT2Q9NPZ5 323 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 THAP10Q9P2Z0 257 aaPredicted RBP9.46□□□□□ -0.89
COPB1-201ENST00000249923 CMAHPQ9Y471 501 aa9.46□□□□□ -0.89
COPB1-201ENST00000249923 TBC1D3BA6NDS4 549 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 H3BSH0 61 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 UBXN7O94888 489 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 ACP2P11117 423 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 MYL12AP19105 171 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 PDX1P52945 283 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 WNT4P56705 351 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 RPS7P62081 194 aaKnown RBP9.46□□□□□ -0.9
COPB1-201ENST00000249923 CEBPEQ15744 281 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 C3orf38Q5JPI3 329 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 TANGO2Q6ICL3 276 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 SLC48A1Q6P1K1 146 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 CD200R1LQ6Q8B3 271 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 QSOX2Q6ZRP7 698 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 KCT2Q8NC54 265 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 SLC37A3Q8NCC5 494 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 OR2L3Q8NG85 312 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 RELTQ969Z4 430 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 C10orf90Q96M02 699 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 BTBD1Q9H0C5 482 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 ENKD1Q9H0I2 346 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 PPIL3Q9H2H8 161 aaKnown RBP9.46□□□□□ -0.9
COPB1-201ENST00000249923 MCUBQ9NWR8 336 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 A0A1W2PP55 124 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 KDM4EB2RXH2 506 aaPredicted RBP9.46□□□□□ -0.9
COPB1-201ENST00000249923 SEC14L5O43304 696 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 DRD2P14416 443 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 GNSP15586 552 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 PLAURQ03405 335 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 COX10Q12887 443 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 FGFBP1Q14512 234 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 ARHGEF6Q15052 776 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 POU4F3Q15319 338 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 P2RY14Q15391 338 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 Q5BKY6 102 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 ZNF628Q5EBL2 1059 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 TMEM240Q5SV17 173 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 KIAA1211LQ6NV74 962 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 TMEM64Q6YI46 380 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 FAM92BQ6ZTR7 304 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 CHMP1BQ7LBR1 199 aa9.46□□□□□ -0.9
COPB1-201ENST00000249923 TRIM69Q86WT6 500 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms